| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4066 |
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| Symbol | luxR |
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| ID | 7388871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3421387 |
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| End bp | 3422133 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643652779 |
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| Product | transcriptional regulator LuxR family |
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| Protein accession | YP_002550952 |
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| Protein GI | 222149995 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.274649 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTGTCG AACTCCTTGA GCCTGGGGGC TATCAAGGGA TCCGTAGCCA GAAGACGGCG
AACAGGCCTG AAGGGCCCAG GTTGCGTGAT GCGATGATCA GGCAGCTTTC CTCGGCAGCG
TCCTCAGGAA AGCTTCGGGT GGCAATGCAT ATCCTGACGG ATTATGCCGG AGCCTCGCAC
TATCTCCTAG CGCGATACGA CCTTATTCAG GAACATGGGC TGGATTTCGT GGTGACGGCC
GACTGGCCGT TCGATCTGGC GCGTGGGGTT GCCACGGAAT TGTCGGCTGC CTGTTCACGG
GCCACCGAGC TTGAAAAATG CCTGGGTCTG CTGCAAGCAA AATTCGTGCT CCTGCCTGAC
GACCTGGAAC TGCCCTTAGG GGCCAGCCGT CAATATTGCT CCGTCATGTT CAATGTTGGG
CGCACACGGC TGGCGCTGGT CATGCTTCTT CCGGACGGAT TCGTAATCTC GCCGGACCGG
TTGCGGGACG TGGGTTTGTT GGCAGCCTAT TGCGTTAGCC TGTCGACGGG ACGGTCGCAG
AAAGCAGATC GTGATTTTGA GCTGACGGAA CGCGAATTGG AATGCCTGTT TTGGATTGCT
GAAGGCAAGA CAAGCGATGA AATAGCCACG ATTCTGGGTA TTTCCCGCAA TACAATCAAT
AATTACATCA CCAGTGTGAT GCGCAAGACA GCTACGAAAA CTCGCTCTGA AGCGATTGCC
TACGCGGTTC GCAACAATCT GGTCTAA
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| Protein sequence | MSVELLEPGG YQGIRSQKTA NRPEGPRLRD AMIRQLSSAA SSGKLRVAMH ILTDYAGASH
YLLARYDLIQ EHGLDFVVTA DWPFDLARGV ATELSAACSR ATELEKCLGL LQAKFVLLPD
DLELPLGASR QYCSVMFNVG RTRLALVMLL PDGFVISPDR LRDVGLLAAY CVSLSTGRSQ
KADRDFELTE RELECLFWIA EGKTSDEIAT ILGISRNTIN NYITSVMRKT ATKTRSEAIA
YAVRNNLV
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