Gene Avi_4038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_4038 
Symbol 
ID7388849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand+ 
Start bp3400142 
End bp3400708 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content54% 
IMG OID643652756 
Productcytochrome B561 protein 
Protein accessionYP_002550930 
Protein GI222149973 
COG category[C] Energy production and conversion 
COG ID[COG3038] Cytochrome B561 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGATGA ATATACCTCT TAATGTGATC GAATCGCGCG GCACGCGCTA CAATAGCGGC 
ATGATCTGGC TGCATTGGGC AACGGCGCTG CTGGTGCTCA CCCTGTTTTT CTCGGCGGAA 
ATCTGGGAAT TTACGGAAAA AGGCGGTGCG CTGCGCAATG GCCTCAAGGC ACTGCATTAT 
GGTGCCGGAA TCACACTGTT CGCAGTGTTT ATACTGCGGC TTGTCTGGCG GATCGCCAGT 
CTTAAAACGC TGCCAGAGGA AGAAAAAGGC GTTTTGGGGT TGATGGCGAA GGCTGTGCAT 
TATCTGCTCT ATTTCGGGCT TGCCGCGCAG ATTTCCCTCG GCTTTCTATG GCGCTGGTCG 
CAAGGCAAAC CCGTGGACTT CTTCGGGCTG TTTTCCATTC CCGATCTCAT CGGTATATCG 
CCTGACTATC GCCATCTGCT GGGTGACATG CATTCTCTCC TCGCCTGGAT CATCATCGGC 
GCGGCCACTC TGCATGCCGT TGCGGCGATT TTCCATCATA CCGTGCTGAA GGATGGCGTG 
TTGATGAAGA TGATGCCCGG CAGGTAA
 
Protein sequence
MTMNIPLNVI ESRGTRYNSG MIWLHWATAL LVLTLFFSAE IWEFTEKGGA LRNGLKALHY 
GAGITLFAVF ILRLVWRIAS LKTLPEEEKG VLGLMAKAVH YLLYFGLAAQ ISLGFLWRWS 
QGKPVDFFGL FSIPDLIGIS PDYRHLLGDM HSLLAWIIIG AATLHAVAAI FHHTVLKDGV 
LMKMMPGR