| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4021 |
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| Symbol | |
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| ID | 7387350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 3385594 |
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| End bp | 3388338 |
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| Gene Length | 2745 bp |
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| Protein Length | 914 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643652741 |
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| Product | hypothetical protein |
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| Protein accession | YP_002550915 |
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| Protein GI | 222149958 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5271] AAA ATPase containing von Willebrand factor type A (vWA) domain |
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| TIGRFAM ID | [TIGR02302] conserved hypothetical protein TIGR02302 |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGGAA ACCGGAGACT GCCCATGACC GCTTCCGGCA CGAAAAAGAG CCAAGTTGCT
CTAAACGGCG ATCAAAAGCT GGCCCGCAGG CTGGCCGTGA ACCGCTGGGC GGCAAGGCTC
GTGCTGTTTT GTGAGCGGTT GCTACCCCTG CTGCTGCTTC CAGCCTCGAT TGCCGCCATT
TTCCTGTCGC TGGCCTGGCT CGGCTTTTTT CGCGAGGCAC CCAGCTATCT GCGCTGGCCG
CTGGTTTTCC TGTTGGTTTT CGGCTTTCTC GCCTCGCTTT TGCCTCTGGC CCGTCTGCGC
TGGCCTCACA TTGGCGAAGC AGACCGGCTG CTGGAAGAGC GCAATCATCT GCCGCATCAA
CCCATCGGCG TGCAGGGTGA GGAACCGGCC TTCGACACGC CTTTTGCCCG CGCCCTCTGG
CATGAGCACC AACGGCGCAT GGCGACCCGG ATCGCCACGC TCGATGCCGG ACGGCCAAAG
CCTGATATCG CCCGCTTTGA CCGCTTCGGC CTGCGCGCCT TGCCCGCTCT GCTTTTGGCG
GTAGCCTTTG CCTATTCCGG CTCGAATGGC GCTGGCCGTC TCACCGATGC CTTTCTGCTG
CAAGACAGGG ACGACGCCGC CCCTACCCTG CGCATCGATG CCTGGATTAC CCCGCCGGGC
TATACGGGCC GCCCCCCTGT TTTCCTCACG GGACGCAATG GCGATGGCAC CCAGGATATC
GCCGTTCCCA CCCAATCGGT GGTCACTGTA CGGTTGACCG GCAGCACCGG AGACGAACAG
GTAGACTTCA AACCGGCATC CGGGGCAGCG GCAGTCGCTT TCCAAGCGGT CAAGGCCGAC
CAGGAAAACA CGCCCGGCCC CTTGGCCACC CCCTCGCCTA GCGTCTCGTC AGCGACGCCA
ACGCCCGCCC AGACGGACGG CAGCGCCCGT ACGCTGACCC TGACATTGGG TGAAAGCGGC
ACGCTGGATC TTGGTAACAG GCAATGGCCG CTGAAGGTCA TTCCCGACCA TGGCCCAACC
ATCGCCTTTG ACGGCATTCC GAAACGTGCG GTCAACGGAG CGCTGGAAAT CGGCTTTACC
GCCCGCGACG ATTACGGTCT GCTGGAAGCG CGCGCCGAGA TCGTCCCTGT GGATGCAGAT
CCGCAGGCCA GCCCTCTCTA TCCCCTGCCC GAGTTCAAGC TGGACCTGCC AAGCCGCAAT
GCCCGCGACA TCAAAAGCAT ATCGAGCCGC AACCTGACCG AACATCCGCT GGCTGGAAAG
AAGGTGCGCA TCACCTTGAT TGCCAAGGAC GGATTGGGCC AGGAGGGCCG CAGCCCAGCC
CATGAGATGA TCCTGCCGGG CCGCAATTTT TCCGAACCGC TGGCCGCCGC CGTGGCCGAA
CAGCGTCAGG TCTTTGCGCT GGACACGCGG CAGATGCCCC GTGCCTTGGC ACTCAACGAA
GCGCTGACGC TGCGCGCCGA TGAAACCATT CCGCAGCTTT CCCATTACCT GCTGATTTCC
TCGGCCCATG CCCGTATGCA GATGGCCAGC ACGACCGAAG CCTTGAAGGA CACGGCAGAT
TATCTCTGGG AAATCGCGCT TGGCATCGAC GATGGCGATG TGTCACTGGC GGAACGCAAG
CTGAGCGAGG CCCAGCAGAA GCTGGCGGAA GCGCTGGAGC GAAATGCGCC CGATGCCGAA
ATCAAGAAGC TGATGGACGA GGTCCGTCAG GCAATGCAGG ACTATATGAA GGCTCTTGCA
GAGCGCCAGC AGCCGCAAAA CGGCCAGCAG AACCAGCAAA GCGCTCAGAA AATGCTGACC
CAGCGCGATC TGGAAAACAT GATGAACCAG ATCGAGAACC TGGCCCGTTC CGGCAACAAG
GATGCCGCCC GCCAGATGTT GCAGGAGATG CAACGGATGA TGAACAATCT CCAGGCCGGA
CGTCCACAGC GCTCCAATCC GCAGCAGCAA CAGCAGACCA GCGAAGCGCG CAAGCAGATC
GACAAGCTCG GCCAGATCAT GCAGGACCAG CAGAAGCTGA TGGACCAGAC TTTCAAACTG
GATCAGGAAT TACAGAGCCG GTCACAGATG GGCGATGACC TTCAGCCGGA AGACGGTGAC
GGCATGAGCC AGGACAATCC TCAGGCTGAA CCAACGCCCG ATGGCGATCA AAACCAGCAA
CAGGGCCAAA ACCCGGACCA GAACCAGAAT AAAGACAGCG CCGGAAAAAA TCCCTCCTCA
CCGGATCAGA TGACCGCCGA GCAATTGCGT GAAGCGCTCA AACAATTGCG CCAGCAGCAG
GATGCGCTTG GCAAGCAGCT GAAGGGCGTC CAGGACGGAC TTGGCAAGCT CGGCATCAAA
CCGGGGGAGA ATTTCGGCCA GGCAGGCCGG GAAATGCAGG GCGCGGGCGA AGCACTCGGC
AAAAGCCAAG GAGACCGGGC GGTGCAGGGT CAAGGTCGGG CGCTGGAAGC CCTGCGCCAA
GGGGCGCGTG ATATGATGAA CCAGATGATG CAGGCCATGC AGCAAGGCCA GGGGCAAGGT
CAGGGCCAGG GGCAAGGCAT GGCGGAAGGC AATCAGGGCG GTCGCGACCC GCTGGGGCGG
CCACGGTCAA CCACCGGACC GGATTTTGGC GAGCGCGTCA AAGTCCCCGA CGAAATCGAC
GTGCAGCGCG CCCGCGAAAT CCTTGACGCG ATCCGCAACA AGCTGGGCAA TAATGCAAGC
CCCGAAGTAG AGCGTCGCTA TCTGGAACGG TTGCTGGACA TGTAA
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| Protein sequence | MTGNRRLPMT ASGTKKSQVA LNGDQKLARR LAVNRWAARL VLFCERLLPL LLLPASIAAI
FLSLAWLGFF REAPSYLRWP LVFLLVFGFL ASLLPLARLR WPHIGEADRL LEERNHLPHQ
PIGVQGEEPA FDTPFARALW HEHQRRMATR IATLDAGRPK PDIARFDRFG LRALPALLLA
VAFAYSGSNG AGRLTDAFLL QDRDDAAPTL RIDAWITPPG YTGRPPVFLT GRNGDGTQDI
AVPTQSVVTV RLTGSTGDEQ VDFKPASGAA AVAFQAVKAD QENTPGPLAT PSPSVSSATP
TPAQTDGSAR TLTLTLGESG TLDLGNRQWP LKVIPDHGPT IAFDGIPKRA VNGALEIGFT
ARDDYGLLEA RAEIVPVDAD PQASPLYPLP EFKLDLPSRN ARDIKSISSR NLTEHPLAGK
KVRITLIAKD GLGQEGRSPA HEMILPGRNF SEPLAAAVAE QRQVFALDTR QMPRALALNE
ALTLRADETI PQLSHYLLIS SAHARMQMAS TTEALKDTAD YLWEIALGID DGDVSLAERK
LSEAQQKLAE ALERNAPDAE IKKLMDEVRQ AMQDYMKALA ERQQPQNGQQ NQQSAQKMLT
QRDLENMMNQ IENLARSGNK DAARQMLQEM QRMMNNLQAG RPQRSNPQQQ QQTSEARKQI
DKLGQIMQDQ QKLMDQTFKL DQELQSRSQM GDDLQPEDGD GMSQDNPQAE PTPDGDQNQQ
QGQNPDQNQN KDSAGKNPSS PDQMTAEQLR EALKQLRQQQ DALGKQLKGV QDGLGKLGIK
PGENFGQAGR EMQGAGEALG KSQGDRAVQG QGRALEALRQ GARDMMNQMM QAMQQGQGQG
QGQGQGMAEG NQGGRDPLGR PRSTTGPDFG ERVKVPDEID VQRAREILDA IRNKLGNNAS
PEVERRYLER LLDM
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