Gene Avi_3998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_3998 
Symbol 
ID7387168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand+ 
Start bp3369474 
End bp3370064 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content59% 
IMG OID643652724 
Producthypothetical protein 
Protein accessionYP_002550898 
Protein GI222149941 
COG category[S] Function unknown 
COG ID[COG1238] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCGAC GCCTTTACGA CTGGACCATG TCGCTTGCCG CCCGCAAATC TGCGGAAGCC 
TGGCTTGGGG CAATCTCCTT TGTGGAAAGC TCGATCTTTC TTGTCCCTGC CGATGTGCTG 
TTCCTGCCCA TGGCGCTGGC CAAGCCGGAA AAGGTCTGGC GCTATGCGAC CATTGCCACC 
ATCACCTCGG TTTTGGGCGG CATAGCTGGT TGGTTTCTCG GTTATTACGC CTATGAAAGC 
ATTGCCCGGC CAATCCTTGA GTTTTACGGC AAGGCCGATG CCTTCGACCA GCTGCGCCTG 
TCGGTGGACT ATGAAACGGT GGTGCTGCTG TTGATCACCT CCGGCCTGGC CCATCTGCCC 
CCCATCAAGG TCGTGACCAT CCTGTCGGGC GTCGCCCATG TGAATATCTG GTTGTTCATC 
ATGACCGCCA TCGTCGCGCG TGGAGGCCGG TTTTTCCTTC TGGCCTGGCT GCTGCGTCGC 
TACGGTGAGC CGATCCGCCA TTTCATTGAA AAACGCCTCG GCCTGATCGC CGCTATCGGC 
GCTATCGTGC TGATCGCCCT GTTCGTCGCC TATCGCCTCC TTGTCCATTG A
 
Protein sequence
MLRRLYDWTM SLAARKSAEA WLGAISFVES SIFLVPADVL FLPMALAKPE KVWRYATIAT 
ITSVLGGIAG WFLGYYAYES IARPILEFYG KADAFDQLRL SVDYETVVLL LITSGLAHLP 
PIKVVTILSG VAHVNIWLFI MTAIVARGGR FFLLAWLLRR YGEPIRHFIE KRLGLIAAIG 
AIVLIALFVA YRLLVH