Gene Avi_3993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_3993 
Symbol 
ID7387330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp3365453 
End bp3366550 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content59% 
IMG OID643652720 
Productoxidoreductase 
Protein accessionYP_002550895 
Protein GI222149938 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCTGT CAAGCTACCG CACACTGGGC CGATCCGGCC TCATCGTCAG CCCGTTGGCG 
CTTGGAACAA TGACGTTTGG TGCCGAGCGC TGGGGCGCAG GGATGAAAGG ATCGCGCCAA
CTCTTCGACA CCTATGTCGC GGCGGGTGGC AATTTCTTTG ATACTGCTGA CGTCTATTCA
GGCGGCCGCA GCGAGGAGAT GCTGGGCGCA TTTGTTGCCG AAACCGGCCT TCGCGACAGA
CTCGTTATCG CCACCAAGTC AGGCTTTGCG CGCAGCCAGG GAACACCTCT GCATGGTGGC
AATGGAGCCA AGAACATCCG GCTCGGGATC GAAGGCTCGC TGAAGCGGCT GAAGACGGAC
TACATCGACA TGTACTGGAT GCACGTTTGG GATCGGACCA CGCCTGCCGA AGAGGTGCTC
CAGACCCTGA CCGATGCAGT CCGCAGTGGG AAAATCCTCC ACTATGGATT CTCCAATACG
CCATCATGGT ATGTTGCAAA GATCGCGACG CTGGCGGCGG TCCACGGACT TCCAATGCCA
ATCGGGCTGC AATATGCCTA TTCCCTCGTA GATCGGGGCG TCGAACTCGA CATCCTTCCG
GCAGCCGCAG AGTTTGGGAT GGGGCTTGTT CCATGGAGCC CTTTGGCAGC TGGATTGCTC
ACGGGCAAAT ACGGTCGCGA CATGCTCGCA CAAGCCGGGG TAAGGGGTGG CCTTCCGGAC
AAGGCTTCGT CTGACGACGA AAGCGATAGC AACGGCCGAC TGAACGGCGA CAACCCTTTC
GGGGGCATGT TGTTCACCGA GCATAATTTT GACGTCGTCG ATGTGGTGCG GCAGGTTGCC
ACGGAACTTG AACAGCCGAT GGCGGCAGTG GCGCTGGCAT GGACGATACA GCGTCCCGGC
GTCGATACCA TTCTCGTCGG TGCCAGCCGA GCCGAGCAGC TCGCGCAGAA TGTGGCATCG
CTGCAGGTGG CGCTGACAGC CGATCAACTC AATCGACTGG ATCAAATCAG CGCACCGCCA
TCGTTCAACC CCTACTTTAT CTTCACATTG CCAACGCAGG TGATGTTTGG AGGGCAGACG
GTCCAGGCTT GGGGGTAA
 
Protein sequence
MDLSSYRTLG RSGLIVSPLA LGTMTFGAER WGAGMKGSRQ LFDTYVAAGG NFFDTADVYS 
GGRSEEMLGA FVAETGLRDR LVIATKSGFA RSQGTPLHGG NGAKNIRLGI EGSLKRLKTD
YIDMYWMHVW DRTTPAEEVL QTLTDAVRSG KILHYGFSNT PSWYVAKIAT LAAVHGLPMP
IGLQYAYSLV DRGVELDILP AAAEFGMGLV PWSPLAAGLL TGKYGRDMLA QAGVRGGLPD
KASSDDESDS NGRLNGDNPF GGMLFTEHNF DVVDVVRQVA TELEQPMAAV ALAWTIQRPG
VDTILVGASR AEQLAQNVAS LQVALTADQL NRLDQISAPP SFNPYFIFTL PTQVMFGGQT
VQAWG