Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3993 |
Symbol | |
ID | 7387330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 3365453 |
End bp | 3366550 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643652720 |
Product | oxidoreductase |
Protein accession | YP_002550895 |
Protein GI | 222149938 |
COG category | [C] Energy production and conversion |
COG ID | [COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACCTGT CAAGCTACCG CACACTGGGC CGATCCGGCC TCATCGTCAG CCCGTTGGCG CTTGGAACAA TGACGTTTGG TGCCGAGCGC TGGGGCGCAG GGATGAAAGG ATCGCGCCAA CTCTTCGACA CCTATGTCGC GGCGGGTGGC AATTTCTTTG ATACTGCTGA CGTCTATTCA GGCGGCCGCA GCGAGGAGAT GCTGGGCGCA TTTGTTGCCG AAACCGGCCT TCGCGACAGA CTCGTTATCG CCACCAAGTC AGGCTTTGCG CGCAGCCAGG GAACACCTCT GCATGGTGGC AATGGAGCCA AGAACATCCG GCTCGGGATC GAAGGCTCGC TGAAGCGGCT GAAGACGGAC TACATCGACA TGTACTGGAT GCACGTTTGG GATCGGACCA CGCCTGCCGA AGAGGTGCTC CAGACCCTGA CCGATGCAGT CCGCAGTGGG AAAATCCTCC ACTATGGATT CTCCAATACG CCATCATGGT ATGTTGCAAA GATCGCGACG CTGGCGGCGG TCCACGGACT TCCAATGCCA ATCGGGCTGC AATATGCCTA TTCCCTCGTA GATCGGGGCG TCGAACTCGA CATCCTTCCG GCAGCCGCAG AGTTTGGGAT GGGGCTTGTT CCATGGAGCC CTTTGGCAGC TGGATTGCTC ACGGGCAAAT ACGGTCGCGA CATGCTCGCA CAAGCCGGGG TAAGGGGTGG CCTTCCGGAC AAGGCTTCGT CTGACGACGA AAGCGATAGC AACGGCCGAC TGAACGGCGA CAACCCTTTC GGGGGCATGT TGTTCACCGA GCATAATTTT GACGTCGTCG ATGTGGTGCG GCAGGTTGCC ACGGAACTTG AACAGCCGAT GGCGGCAGTG GCGCTGGCAT GGACGATACA GCGTCCCGGC GTCGATACCA TTCTCGTCGG TGCCAGCCGA GCCGAGCAGC TCGCGCAGAA TGTGGCATCG CTGCAGGTGG CGCTGACAGC CGATCAACTC AATCGACTGG ATCAAATCAG CGCACCGCCA TCGTTCAACC CCTACTTTAT CTTCACATTG CCAACGCAGG TGATGTTTGG AGGGCAGACG GTCCAGGCTT GGGGGTAA
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Protein sequence | MDLSSYRTLG RSGLIVSPLA LGTMTFGAER WGAGMKGSRQ LFDTYVAAGG NFFDTADVYS GGRSEEMLGA FVAETGLRDR LVIATKSGFA RSQGTPLHGG NGAKNIRLGI EGSLKRLKTD YIDMYWMHVW DRTTPAEEVL QTLTDAVRSG KILHYGFSNT PSWYVAKIAT LAAVHGLPMP IGLQYAYSLV DRGVELDILP AAAEFGMGLV PWSPLAAGLL TGKYGRDMLA QAGVRGGLPD KASSDDESDS NGRLNGDNPF GGMLFTEHNF DVVDVVRQVA TELEQPMAAV ALAWTIQRPG VDTILVGASR AEQLAQNVAS LQVALTADQL NRLDQISAPP SFNPYFIFTL PTQVMFGGQT VQAWG
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