Gene Avi_3917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_3917 
Symbol 
ID7387274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp3275958 
End bp3276320 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content63% 
IMG OID643652658 
Producthypothetical protein 
Protein accessionYP_002550839 
Protein GI222149882 
COG category[S] Function unknown 
COG ID[COG2832] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0768247 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGCTGA TATTGCTGGG CTTGGGCTGG TTTTTCGTCG CGCTGGGCAT TGTCGGCATT 
TTCCTTCCAG TGCTACCGAC CACGCCGTTC ATTATCCTTG CCGCCGCCCT GTTTGCTCGC
TCCTCGCCGC GCTTTGAGCA ATGGCTGCTC GACCATCCCC GTTTCGGCCA GCCGCTCCTG
GACTGGCGCC GCCAAGGTGC AATCTCGCGG CGCGCCAAGG TCGCCGCCGT CCTGGCGATG
GCCGTCAGCT TTGCCGTGAT GTGGTTCTTC TCATCCGCAC CGCTTTACGT GCGCGTTGGT
ACCGGGATCA TCCTACTCTG CTCGGCGGCT TTTGTCGTCA CCCGGCCTGC GCCGAAACAG
TAA
 
Protein sequence
MRLILLGLGW FFVALGIVGI FLPVLPTTPF IILAAALFAR SSPRFEQWLL DHPRFGQPLL 
DWRRQGAISR RAKVAAVLAM AVSFAVMWFF SSAPLYVRVG TGIILLCSAA FVVTRPAPKQ