| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3910 |
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| Symbol | |
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| ID | 7388587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 3271575 |
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| End bp | 3272522 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643652654 |
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| Product | dehydrogenase |
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| Protein accession | YP_002550835 |
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| Protein GI | 222149878 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.715875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTCTT CTGAAAACAC CGGAACCAGG ATTGCCCTGG CGCTGGCCGG CGTCGGCAAG
ATTGCCCGCG ACCAGCATAT TCCGTCCTGC GAAAACGGCA GTGACTTCGT GATCGCCGCC
GCCATCAGCC GCAATGGCAA GATCGACAGC GCCGAGAATT TCGAAAATTT CGACGTGTTT
CTGGAGACCC GCCAGGATAT CCGCGCCATC GCCCTCTGCA CCCCGCCTGA CGTCCGTTTT
GCCATGGCCA AGAAGGCGAT TGCCAACGGC CTCGACGTGC TGATGGAAAA GCCGCCTGCC
GCAACCATCG GCGAAGCCCA GGCGCTGGCC GAATTGGCGC GTGACGCGGG CGTCACCCTG
TTTGCCACCT GGCATTCCCG CTTTGCCAAT GGTGTTGAAC CAGCCCGCCA ATGGCTCTTG
GACAAGACCA TCACCCGGAT TGAGATCACC TGGAAGGAAG ATGTCCGTCG CTGGCATCCC
GGACAGGCCT GGATCTGGGA GGCTGGCGGT TTCGGCGTGT TCGATCCGGG CATCAATGCC
CTGTCGATCC TGACCGCGAT CATTCCAGGC CAAACCATCG TTGAAAAAGC CGCCTTGTCC
TTCCCCGCCA ATCGCCAGCA GCCGATTGCC GCCAGCCTGA CGATGCGCAG TGCCGCCGGT
GCGCCGATCA AGGCCGAGTT CGACTGGCGC CAGGAAGGTC CGCAGACCTG GGATATCGTC
GTCGAGACGG ATCAGGGCAC GCTGAGGCTC GCAAAAGGCG GCGCGGAACT CTATATAAAT
GAGACACTGA CCGTGGAAGG CCCCGACCGG GAATATGCCC GCATCTACAC GCGTTTTGCC
GAACTGGTGC GCAGCCGCGA AAGCGACGTC GATTTCCAGC CGCTTCGGCT GGTTGCCGAC
GCCTTTCTGA CGGCGGAGCG TCATGAAGTG GAAGCCTTCA TCGAGTAA
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| Protein sequence | MTSSENTGTR IALALAGVGK IARDQHIPSC ENGSDFVIAA AISRNGKIDS AENFENFDVF
LETRQDIRAI ALCTPPDVRF AMAKKAIANG LDVLMEKPPA ATIGEAQALA ELARDAGVTL
FATWHSRFAN GVEPARQWLL DKTITRIEIT WKEDVRRWHP GQAWIWEAGG FGVFDPGINA
LSILTAIIPG QTIVEKAALS FPANRQQPIA ASLTMRSAAG APIKAEFDWR QEGPQTWDIV
VETDQGTLRL AKGGAELYIN ETLTVEGPDR EYARIYTRFA ELVRSRESDV DFQPLRLVAD
AFLTAERHEV EAFIE
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