| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3906 |
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| Symbol | gguB |
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| ID | 7388584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 3267319 |
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| End bp | 3268518 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643652651 |
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| Product | ABC transporter membrane spanning protein (sugar) |
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| Protein accession | YP_002550832 |
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| Protein GI | 222149875 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4214] ABC-type xylose transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.611947 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTCCG TCAACCCTTC CACGGAAGAA CAGAACGTGG TGTCGGTCGC CTCCTATATT
CGCGCCAATA TCCGCGAATA TGGCATGTTG ATCGCGCTCG TCGCCATCAT GGTGTTTTTC
CAGTTCTACA CGGGCGGCAT TCTCTTCAAG CCGGTCAACC TGACCAATCT AGTTTTGCAG
AATTCCTTCA TCATCATCAT GGCGCTTGGC ATGCTGCTGG TGATCGTTGC CGGACATATC
GATCTGTCGG TCGGCTCCAT CGTCGGCTTC ATCGGTGCCA TTGCCGCCAT CCTGACCGTG
CAATGGGGCC TTGGCTTCCT GCCAACGGTT TTGATCTGTT TGGTGATTGG CGGTGTGATC
GGTGCGGCAC AGGGCTATTG GGTCGCCTAT CACCGCATTC CGTCCTTCAT CGTCACGCTG
GCTGGGATGC TGGTGTTTCG TGGCCTGACC CTGTTCGTGC TCGGTGGCCG TAACATCGGT
CCTTTTCCGA AGGAATTCCA GCTGATCAGC ACCGGCTTCC TGCCGGATCT GTTCGACATG
GGTGACATCC ATTCGACATC GATTATCCTG ACCGTGATCG GCGCCGTCGC GCTGTTCGTG
CTTGCCTGGC GTCGTCGGCA GGTCAATGTC GCCCACGGCA TCGATGTCGA GCCGTTCGGC
TTCTTCGTGG CGCAGAACCT GATCGTCTCA GGCGCTGTCT TGCTGCTCGG CTATCTGCTG
TCAACCTATC GCGGCATGCC GAACGTTCTG GTCGTCATGC TCGTGCTGAT CATGCTCTAT
TCCTTCGTCA CCCGCCGCAC CACCATTGGT CGCCGGATCT ACGCCATGGG CGGCAATGAA
AAGGCCACCA AGCTGTCGGG TATCAATACC GAGCGGCTGA GCTTCCTGAC CTTCGTCAAT
ATGGGCGTTC TGGCGGGCCT CGCCGGCATG ATCGTCGCAG CGCGCCTTAA CTCCGCAACG
CCGAAGGCTG GCAGCGGCTT CGAGCTGGAC GTCATTGCGG CCTGCTTTAT CGGCGGCGCA
TCGGCCTCAG GCGGCGTCGG CAAGATCACC GGTGCGGTCA TCGGTGCCTT CATCATGGGC
GTGATGAACA ACGGCATGTC GATCATCGGT CTCGGCATCG ACTTCCAGCA GATGGTCAAG
GGCTTGGTGC TGCTCGCCGC CGTGTTCTTC GACGTCTATA ATAAGAATAA AGCAGCCTGA
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| Protein sequence | MSSVNPSTEE QNVVSVASYI RANIREYGML IALVAIMVFF QFYTGGILFK PVNLTNLVLQ
NSFIIIMALG MLLVIVAGHI DLSVGSIVGF IGAIAAILTV QWGLGFLPTV LICLVIGGVI
GAAQGYWVAY HRIPSFIVTL AGMLVFRGLT LFVLGGRNIG PFPKEFQLIS TGFLPDLFDM
GDIHSTSIIL TVIGAVALFV LAWRRRQVNV AHGIDVEPFG FFVAQNLIVS GAVLLLGYLL
STYRGMPNVL VVMLVLIMLY SFVTRRTTIG RRIYAMGGNE KATKLSGINT ERLSFLTFVN
MGVLAGLAGM IVAARLNSAT PKAGSGFELD VIAACFIGGA SASGGVGKIT GAVIGAFIMG
VMNNGMSIIG LGIDFQQMVK GLVLLAAVFF DVYNKNKAA
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