| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3892 |
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| Symbol | |
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| ID | 7388572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 3252176 |
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| End bp | 3253576 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643652639 |
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| Product | glucuronate isomerase |
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| Protein accession | YP_002550820 |
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| Protein GI | 222149863 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1904] Glucuronate isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.660949 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTTCATC CAGACAGGCT TTTTCCCCTT GACCCCACAG CACGCACGCT GGCGCGCACG
CTTTATGACA CGGTCAGCGA CCTGCCCATC GTCAGCCCGC ATGGCCACAC TGACCCCCGC
TGGTTTGCGG AAAATGAAGC GTTTCCCGAT CCGGCCCAGT TGTTCGTGGT GCCGGACCAT
TATGTGTTTC GCATGCTCTA TTCCCAGGGT ATCGACCTCA CGGCGCTTGG CGTGCCGCGT
GTCGATGGCG GCATGACGGA AACCGATGGC CGCAAGATCT GGCGGCTGTT TGCCGAAAAC
TTCCACCTGT TTCGCGCCAC GCCCAGCCGC ATGTGGCTGG ACCATGCTTT TGAGGATGTG
TTCGGACTGA CGACCCGGCT GTCGGCGCAG ACGGCGGACC AGACCTATGA CCATATCGCC
GATTGCCTGA CGAAACCGGA ATTTCGCCCC CGCGCCCTGT TCGAGCGCTT CAATATCGAA
GTGATCGCCA CCACGGAAAG CCCGCTGGAC GAGTTGAAAT GGCATGAGAC GATCCGCGCC
TCCGGCTGGG ATGGCCGCGT CGTCACCGCT TACCGGCCTG ACCCTGTAGT CGATCCGCAA
TTTGAAGGCT TTGCCACCAA TATCGAGCGG TTCGGGCAAT TGGCTGACGT CGATGCGACA
AGCTGGAGCG GCTATCTGGA GGCGCATCGC AACCGCCGCG CCTTCTTCAA ATCCTATGGC
GCCACGAGTT CCGACCACGG CCACCCCTCG GCCCGCACCG AGGATCTGCC CCAGGATCAG
GCCAAGGCGC TGTTCGATAA GGCGCTGACC GGGCGGATCA CCCCCGATGA GGCAGATGCC
TTCCGTGGCC ATATGCTGAC GGAAATGGCC CGGATGAGCC TGGAGGATGG GCTGGTGCTG
CAAATCCATC CCGGTTCCTA CCGCAACCAT TCCGCCGGTA TCATGGCCAA ACATGGCCGC
GACAAGGGCT TCGATATCCC GACCCGCACC GATTACGTCC GGGCGCTAAA GCCGCTTCTG
GATGCGGTCG GCATGGAAAA GGACCTGACG GTCATTCTCT TCACGCTGGA CGAAACCAGC
TATTCGCGCG AATTGGCACC GTTGGCCGGG GCCTATCCGG CCCTGAAGCT CGGCCCCGCC
TGGTGGTTCT TCGACAGCCC GGATGGCATG CGCCGCTTCC GCGAGACCAC CACCGAAACC
GCCGGTTTCT ACAATACTGT CGGCTTCAAC GACGACACCC GCGCCTTCTG CTCCATCCCG
GCCCGCCATG ATGTGGCAAG GCGGGTGGAT TGCGCCTATC TGGCCGAACT GGTGCTGACG
GGCCGACTGG AGGAGGACGA AGCCCAGGAG CTTGCAGGCG ATCTCGCCTA CGGACTGGCG
AAAAAGGCCT ATCGGCTCTA G
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| Protein sequence | MLHPDRLFPL DPTARTLART LYDTVSDLPI VSPHGHTDPR WFAENEAFPD PAQLFVVPDH
YVFRMLYSQG IDLTALGVPR VDGGMTETDG RKIWRLFAEN FHLFRATPSR MWLDHAFEDV
FGLTTRLSAQ TADQTYDHIA DCLTKPEFRP RALFERFNIE VIATTESPLD ELKWHETIRA
SGWDGRVVTA YRPDPVVDPQ FEGFATNIER FGQLADVDAT SWSGYLEAHR NRRAFFKSYG
ATSSDHGHPS ARTEDLPQDQ AKALFDKALT GRITPDEADA FRGHMLTEMA RMSLEDGLVL
QIHPGSYRNH SAGIMAKHGR DKGFDIPTRT DYVRALKPLL DAVGMEKDLT VILFTLDETS
YSRELAPLAG AYPALKLGPA WWFFDSPDGM RRFRETTTET AGFYNTVGFN DDTRAFCSIP
ARHDVARRVD CAYLAELVLT GRLEEDEAQE LAGDLAYGLA KKAYRL
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