Gene Avi_3844 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_3844 
Symbol 
ID7388532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp3193477 
End bp3193920 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content60% 
IMG OID643652599 
Producthypothetical protein 
Protein accessionYP_002550780 
Protein GI222149823 
COG category[S] Function unknown 
COG ID[COG5488] Integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.352753 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTGGTACCCT ATCGGTCGCT AGGCCGAAAG GGGTTTCGCA TCATGCTGAT GCTGTCCGGG 
CTGGTCTGTG TCGGCTATGG CGGGTTTTTC CTGACGACCG GTGCCTGGCC AATCGGGTTT
TTCTTCGGGC TGGATTTTCT GCTGCTCTAC GGTGCTTTCC GGCTGAATTA CCGCGCCGCC
AAAGCCCGCG AGGAAGTCAC GGTATCACGC ACCGCCATCT CTATCCGCAA ATTCACCCCC
TCGGGGCGGA TGACCGAATT TCGCTGGAAC CCGTTCTGGG CGCGGTTCTT TGTCCGCCGC
CACGAGGAAT TCGGGATCAT CTCCATGTCG GTGCAGGGGC AAGGCCGGGC CACCGATGTC
GGCTCGTTCC TCAATCCCGA TGATCGCGAA AGCTTTGCCA AGGCCTTTCG CGGTGCCTTG
GCAACGGTAA CGCAGCGGAT CTGA
 
Protein sequence
MVPYRSLGRK GFRIMLMLSG LVCVGYGGFF LTTGAWPIGF FFGLDFLLLY GAFRLNYRAA 
KAREEVTVSR TAISIRKFTP SGRMTEFRWN PFWARFFVRR HEEFGIISMS VQGQGRATDV
GSFLNPDDRE SFAKAFRGAL ATVTQRI