| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3837 |
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| Symbol | emrA |
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| ID | 7388527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3188788 |
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| End bp | 3189963 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643652594 |
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| Product | multidrug resistance efflux pump |
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| Protein accession | YP_002550775 |
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| Protein GI | 222149818 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR00998] efflux pump membrane protein (multidrug resistance protein A) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCGGCG AGGCGGGTTC CGATCCGGTG ACAGGTGACG CCACGGCACG CGACGCCAAG
GCGCGGGCTG AAACCGCATC GCCCGCCGCG AAGGTGGCGC CCGCCGCAGG CCAGGCTCCG
CCGAAGAAGC GCCGCAACTT TGCGCTGCCG GTCATCGCGC TGGCCGTTTT GGCGGGTGCG
GGCTATTACG GTTACAATTA CTGGACCGAG GGCCGGTTCA TGATCTCCAC CGACGACGCC
TATATTGGCG GCGATATCGC GGTGATTACC CCGAAGGTGA CCGGCTATGT CCAGTCGGTC
TCGGTGACTG ACAACGATCA TGTTAAGAAG GGCGACGTGA TCGCCACGCT CGATGACGGC
GATTATCGCA TTGCGCTCGA TCAGGCCAAG AGCCAGCTCG CCACGCAGAA GCTGACGGTC
GAGCGCATCG AGGCGCAGGT GCAGGGCGGC GAAGCGGCAC TTCAGCAGTC CAAGGCGCAG
CAGGCATCCG CCGAGGCGAC GTTGCGTACG GCGCAATTGT CCTTCAAGCG CGTCACGGAT
TTGCGGGCCC AGTCCGTGAT GTCTCAGTCG GAGCTGGACA CGGCAACATC GACGCTCGCT
GTCGCCCAGG CCAATGTGGA TGCTGCGGTT GCGGCTGTTG CCTCCTCCGT TTCAAGCATT
GCCGTCCTCA AGGCCCAGAA AGCCGAGGCG CAGGCTGGCG TGCTGACAGA AGAAACGGTG
GTTGCAAAGG CGCAGCGCGA TCTGGATTTC ACCGTGCTGC GCGCGCCTTA TGACGGTGTG
ATCGGCAATC TGGGCGTCCA GGTCGGCGAT CTCGTGTCGA GCAGCAAGCG GCTTGCCTCA
CTGGTGCCGA TTGGCCGTCT CTATATCGAT GCGAACTTTA AGGAAACGCA GCTTTCCGGT
ATCGTGCCGG GCTCGAAGGT GCGGGTGCAT GTGGATGCCT ATGATGAGCA TGCCTTCGAG
GGTAGGGTCG TCTCGATCGC CGCGGGGTCC GGTTCGGTCT TCTCCATGCT GCCGGCGGAA
AACGCCACGG GCAATTTCAC CAAGGTCATC CAGCGTGTTC CGGTGCGGAT CGCCATTCCG
CAGGAGATAC TCGACAAGGG TTATCTGCGT GCGGGTCTGA GTGTTGTGGT CGATATCGAC
ACCCGCACCG CGCCGAAGGC GCCTGACGCG AAGTAA
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| Protein sequence | MTGEAGSDPV TGDATARDAK ARAETASPAA KVAPAAGQAP PKKRRNFALP VIALAVLAGA
GYYGYNYWTE GRFMISTDDA YIGGDIAVIT PKVTGYVQSV SVTDNDHVKK GDVIATLDDG
DYRIALDQAK SQLATQKLTV ERIEAQVQGG EAALQQSKAQ QASAEATLRT AQLSFKRVTD
LRAQSVMSQS ELDTATSTLA VAQANVDAAV AAVASSVSSI AVLKAQKAEA QAGVLTEETV
VAKAQRDLDF TVLRAPYDGV IGNLGVQVGD LVSSSKRLAS LVPIGRLYID ANFKETQLSG
IVPGSKVRVH VDAYDEHAFE GRVVSIAAGS GSVFSMLPAE NATGNFTKVI QRVPVRIAIP
QEILDKGYLR AGLSVVVDID TRTAPKAPDA K
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