| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3830 |
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| Symbol | |
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| ID | 7388521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3180704 |
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| End bp | 3181885 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643652588 |
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| Product | NAD binding oxidoreductase |
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| Protein accession | YP_002550769 |
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| Protein GI | 222149812 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAATCG AAGCAAGCAA ATCCGAGCAA CGCGCCGCGA AAATTCGTCT CGGCATGGTG
GGCGGCGGGC AGGGCGCGTT TATTGGCGCG GTCCACCGCA TGGCGGCAAG GCTCGACGAT
CATTACGATC TTGTGGCGGG AGCTTTGTCC TCCACGCCGG AGAAATCCCT GGCCTCGGGC
CGGGATCTGG GGCTTGATCC CACCCGCTGC TACGGCTCTT TTGAAGAAAT GGCAGAGAAA
GAGGCGGCGC GCCCGGATGG GATCGAGGCG GTGTCTATCG TCACGCCCAA TCACATGCAT
TACCCGGCGG CGAAAGCCTT TCTGGAACGC GGCATCCATG TGATCTGCGA CAAGCCGCTG
ACCTCCAATC TGGACGACGC CAAAAAGCTG AAAGAGGTGG CCGACAAAGC CAAGGCGCTG
TTCATCCTCA CCCACAATTA CACGGGCTAT CCCATGGTGC GTCATGCCCG TGAACTGGTG
CAAAACGGCG AGTTGGGGGA GATCCGGCTG GTACAGATGG AATATCCGCA GGATTGGCTG
GCGGAACCGG TAGAGCAGAC AGGCGCCAAG CAGGCCGTCT GGCGCACCGA CCCGGCCCAA
TCCGGTGTCG GCGGCTCCAC CGGCGATATC GGCACCCATG CCTATAACCT CGGCAGCTTC
ATTTCCGGGC TGGAACTGGA GGAACTCGCC GCCGATGTGC ACACCTTTGT CGAAGGCCGC
AGGCTGGATG ACAACGCCCA TGTGATGCTG CGTTTCCAAG GCGGAGCCAA AGGCTTGCTC
TGGTGCAGCC AGGTAGCAAC CGGCAATGAA AACGGCTTGA AAGTGCGTAT CTACGGCACA
AAAGCCGGGA TTGAGTGGAC ACAGGCCGAC CCGAACTACC TCTGGTATAC CAAGCTCGGC
GAACCGAAAC AGCTAATCAC CCGCGGCGGT GCTGGTGCTG GCGGGGCAGC TGCCCGCGTC
ACCCGCATTC CCGGCGGCCA TCCCGAAGGC TATCTCGAAG CTTTTGCCAC CATCTATTCC
GAGGCGGCCC AAGCGATCCT TGCGGCAAGA ACGGGGGCGG CGGTTGATCC TGATGTGGTT
TATCCCACGG TGGATGATGG GGTGAAGGGC GTGGCCTTTG TGACGGCGTG TATTGAATCA
TCCAAGCAGA ATGGGGCCTG GGTGCGGGTT TCGTCTCGAT AA
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| Protein sequence | MTIEASKSEQ RAAKIRLGMV GGGQGAFIGA VHRMAARLDD HYDLVAGALS STPEKSLASG
RDLGLDPTRC YGSFEEMAEK EAARPDGIEA VSIVTPNHMH YPAAKAFLER GIHVICDKPL
TSNLDDAKKL KEVADKAKAL FILTHNYTGY PMVRHARELV QNGELGEIRL VQMEYPQDWL
AEPVEQTGAK QAVWRTDPAQ SGVGGSTGDI GTHAYNLGSF ISGLELEELA ADVHTFVEGR
RLDDNAHVML RFQGGAKGLL WCSQVATGNE NGLKVRIYGT KAGIEWTQAD PNYLWYTKLG
EPKQLITRGG AGAGGAAARV TRIPGGHPEG YLEAFATIYS EAAQAILAAR TGAAVDPDVV
YPTVDDGVKG VAFVTACIES SKQNGAWVRV SSR
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