| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3801 |
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| Symbol | |
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| ID | 7388252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 3161700 |
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| End bp | 3163328 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643652568 |
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| Product | Phospholipase C protein |
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| Protein accession | YP_002550749 |
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| Protein GI | 222149792 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3511] Phospholipase C |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.228804 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTCTTC ATCCTCGGCA GCGAAACATG TGTGCCGGTT CAATTCTCAT GTCTGCGTCT
CTCTGTCTCA TCCCCACCGC CCCGGCGGCG GCTGAGGTCA ATACGGCAAC GCCGATCAAG
CATCTGGTGG TGATCTTCCA GGAAAACGTC GCCTTCGACC ATTATTTCGC GACCTATCCG
AAAGCTGCCA ATGTCGAGGG TGAGCCCGCC TTTACTGCCG CGCCGCAGAC GCCTGCCGAT
ATCGATACGC TGGCCCATGC CGGACTGCTG GAGACCAATC CGAACAAGAC CAATCCGGGC
AATGGCCCCG ATGCCACCGC CCCATTCCGT CTCGATCGCA CCCAGGCCGC CACCAATTCG
CAGAACCATG GCTATACCGC CGAACAGGCC GCCTATGACG CTTTCGCCAT GGACCTGTTT
CCCGCCAATA CCGGGCGCGG CACCAAGGGT GCGGCCGGTG CCTTTGGCAC CAAAGGCCAG
GTCATGGGCT ATTATGACGG CAATACCGTT ACAGCGCTGT GGAACTACGC CCAGAATTTT
GCCCTGAACG ACCGATCTTT CTCCACCAAT TTCGGCCCCT CGACCCCCGG CGCCATCAAC
CTCGTCTCCG GCCAGACCAA TGGCGTGACC CTGCCACCCG GTTACACGCT GGAAAAGGAC
GGCACCTATG CCAAGGGCGA AGTCGTGCCT GATGGCAATG GCGGCTGGAC GATGATTTCC
GATCTCGACC CCACCGGCGA TGTTTGCTCG AAAGGCCAGA CAGCCCTGAT GACCGGCCGC
AATATCGGCG ACCTCCTGAA CGACAAGGGC CTGACCTGGG GCTTTTTCGA GGGCGGCTTC
GATCTGACGC TCAACAATCC CAATGGCACG ACCGGTTGCA AGCGCACGAC GACATCGGCA
ATCACCAAGG TCGATGAAGT CGATTACATT CCCCATCACC AACCCTTCCA ATACTATCCC
TCGACCGCCA ATCCCCAGCA TATCCGCCCG AGTTCGGTCG CCGCCATCGG CACCAGCCAG
GACGGCGGCG CCAACCACCA GTATGACATC AATGATTTCT ATGCGGTTCT GAGCAACGGT
ACTCTGCCCG CCGTCAGTTT CCTAAAGGCG CCCGCCTATC AAGACGGCCA TGCTGGCTAT
TCCGATCCGC TTGATGAGCA GGAGTTCGTC GCCAATGTCG TCAACAAACT CCAGCAATCG
CCGGAGTGGA AGGACACCGC CGTGGTGCTG CTTTATGACG ATTCCGACGG CTGGTATGAC
CACGCCCATA ACGTCGTCAA TCCGTCCAGC ATTCCCGTCA AAGGCTATGA CGTGCTTGAT
GGTGCGGCCT GCGGCACCGG AACTCCCTTG CCCGGTGTCA ACGGCCAGCC AGTCCAGGGC
CGTTGCGGCT ATGGCACCCG TCAGCCATTG CTTGTGATCT CGCCTTATGC CAAGCAAAAC
TATGTCGATC ATACCCTGAC CGACCAGACC TCGGTCATGC GGTTTATCGA GGATAACTGG
ATGGCGGGGC AAAGGCTGGG CGGCGGCTCC TTCGATGCCA TTGCAGGCTC CCTGAACGGC
ATGTTCAATT GGTCCCATGC TCGCAGCGAT ACGCTGATCC TCGATCCGAA GACTGGCCTG
AAAAGCTAA
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| Protein sequence | MPLHPRQRNM CAGSILMSAS LCLIPTAPAA AEVNTATPIK HLVVIFQENV AFDHYFATYP
KAANVEGEPA FTAAPQTPAD IDTLAHAGLL ETNPNKTNPG NGPDATAPFR LDRTQAATNS
QNHGYTAEQA AYDAFAMDLF PANTGRGTKG AAGAFGTKGQ VMGYYDGNTV TALWNYAQNF
ALNDRSFSTN FGPSTPGAIN LVSGQTNGVT LPPGYTLEKD GTYAKGEVVP DGNGGWTMIS
DLDPTGDVCS KGQTALMTGR NIGDLLNDKG LTWGFFEGGF DLTLNNPNGT TGCKRTTTSA
ITKVDEVDYI PHHQPFQYYP STANPQHIRP SSVAAIGTSQ DGGANHQYDI NDFYAVLSNG
TLPAVSFLKA PAYQDGHAGY SDPLDEQEFV ANVVNKLQQS PEWKDTAVVL LYDDSDGWYD
HAHNVVNPSS IPVKGYDVLD GAACGTGTPL PGVNGQPVQG RCGYGTRQPL LVISPYAKQN
YVDHTLTDQT SVMRFIEDNW MAGQRLGGGS FDAIAGSLNG MFNWSHARSD TLILDPKTGL
KS
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