| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3798 |
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| Symbol | |
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| ID | 7388249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 3157411 |
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| End bp | 3158397 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643652565 |
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| Product | hypothetical protein |
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| Protein accession | YP_002550746 |
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| Protein GI | 222149789 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.599459 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGACTG TTGCCCCGCT CGATCTGGAA GGCCACGTAC TGACCGCGGC CTTCCTTGGA
GACATTCCGG TTTTCGTCAC AGCGGCTGGC GCTGTTCACC GTCTGGATGG CGGCGAGCAG
GTCACCGAAA CCGGGTCGGG CCTGCTGACC GCCATCAAGG ACGACCATAA CCAGACGCTT
TTGACCGGCG GCGAGGATGG CAAGGTGCTG CGCATCGCTC ATGATGGCAC GGTCACGGAA
CTGGCGCACG CACCCCGCAA GTGGATTTCC GTTGTCGCAG CCGGGCCGCA AGGCGCGGTT
GCCTATGGTT ATGGCAAATC CGCCTTCGTG CGGCTGGCAA GCGGCGCGAT ACATCCCTAT
GAAGAGGAAC GCACAGTCGA GGGTCTCGCC TTTGCGCCCA AGGGTTTGCG CATCGCCATT
TCCCGCTACA ATGGCGTGAC GTTGCGCTTT GCAGCAGCCG AGGGCAAGCC AGTCGATCTG
GAATGGAAGG GCGCCCATAC TGGCGTCAGT TTTTCGCCTG ACAACCGTTT CGTCGTCACC
ACCATGCAGG AAAATGCCCT GCATGGCTGG AAGCTGGATG GTGCTGGCAG TGATACCCGC
CATATGCGCA TGACCGGCTA TCCCGCCAAG GTCAAGTCGA TCTCCTGGTC GGCCAAGGGC
AAGTGGCTCG CCTCATCCGG CGCGCCCGCT GCGATCGTCT GGCCCTTTGC CTCCAAGGAC
GGCCCGATGG GCAAGGCCCC GCAAGAGCTG GGCACACGCG CCAATATCAT GGTCACCCAG
GTCGCCTTCC ATCCCGCAGA AGAGGTGCTG GCCATTGGCT ATATCGACGG CATGGTACTG
GCGGTGCGCC TGGCCGACGG CAAGGAGGCG CTGCTGCGCC GCCCGGGCAA GGGTGCGATC
ACCAGCCTGG GCTGGAGCGC AAGCGGCAAG TTGCTGGCCT TCGGGTCTGA AGCTGGCGAT
TGCGGCGTGA TAGATATCTC CGGCTGA
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| Protein sequence | MPTVAPLDLE GHVLTAAFLG DIPVFVTAAG AVHRLDGGEQ VTETGSGLLT AIKDDHNQTL
LTGGEDGKVL RIAHDGTVTE LAHAPRKWIS VVAAGPQGAV AYGYGKSAFV RLASGAIHPY
EEERTVEGLA FAPKGLRIAI SRYNGVTLRF AAAEGKPVDL EWKGAHTGVS FSPDNRFVVT
TMQENALHGW KLDGAGSDTR HMRMTGYPAK VKSISWSAKG KWLASSGAPA AIVWPFASKD
GPMGKAPQEL GTRANIMVTQ VAFHPAEEVL AIGYIDGMVL AVRLADGKEA LLRRPGKGAI
TSLGWSASGK LLAFGSEAGD CGVIDISG
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