| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3779 |
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| Symbol | |
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| ID | 7388233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3146108 |
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| End bp | 3147169 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643652549 |
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| Product | nucleoside-diphosphate-sugar epimerase protein |
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| Protein accession | YP_002550730 |
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| Protein GI | 222149773 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTGGAT CAGCATTGGT TGTCGGCGCA AGCGGCATTG TTGGCAGTGC GACGGTGGAT
CTCCTGTTGG CGAAGGGATG GGCCGTGTAC GGACTGGCCC GGTCGCCGGT TGCCAAAGAC
GGCATGCAGC CCGTGGCCGC CGATCTTCAG GACAGTGAGG CGACAGCGCG GGCTCTTTCC
GATGTGAAAC CCGACGTGGT GTTCATCTCG ACATGGGCGC GGCAATCAAG CGAGGCGGAA
AACATCCGGG TCAATGCGGC GATGGTGCGT AACGTGCTTG ACGCGCTGCG TCCCGCAGGG
TCCGTCGCCC ATGTGGCATT GGTCACGGGG CTCAAACATT ATCTCGGCCC CTTCGAGGCC
TATGGCAAGG GTACGCTGCC GCAGACACCA TTCCGGGAAG ATCAGGGCAG GCTGGATGTC
GAGAATTTTT ACTATGCGCA GGAAGATGAA GTGTTTGCCG CAGCAAAGCG CGACGGATTT
TCCTGGAGCG TGCATCGCCC CCATACGGTG ATCGGCAAGG CAGTTGGCAA TGCCATGAAC
ATGGGAACGA CGCTGGCCGT CTATGCGACG CTCTGCCGGG AAACCGGGCG ACCCTTCCGT
TTCCCCGGTT CTTCCGTGCA ATGGAACGGT CTGACGGATA TGACTGATGC TGGCGTTCTG
GCCGAACAAT TGCTCTGGGC CGCAACGACC CCGCAATGCC GCAACCAGGC CTTCAACGTG
GTCAATGGCG ATATTTTCCG CTGGAGTTGG ATGTGGGGCC GGATTGCCAA TTGGTTTGGG
CTGGAACCGG CGCCGTTTGA CGGGACGATC CTGCCGCTGG AACAGCAGAT GGCAGAGGAC
GCCGCCATCT GGCGGGAGCT CGCCGAGCGC CATGGCCTGA TCGAAAAAGA CCTGTCGCGC
CTGGCCTCAC CTTGGCATAC GGACGCCGAT CTTGGGCGGC CGATTGAAGT GGTGACCGAC
ATGAGCAAGA GCCGGGTGAT GGGCTTTGAC CGCTACCAGC CCACCGACGA GGCGTTTTTC
ACCCTGTTTG GGCAACTGCG TGGGGAAAGG CTCATTCCTT GA
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| Protein sequence | MVGSALVVGA SGIVGSATVD LLLAKGWAVY GLARSPVAKD GMQPVAADLQ DSEATARALS
DVKPDVVFIS TWARQSSEAE NIRVNAAMVR NVLDALRPAG SVAHVALVTG LKHYLGPFEA
YGKGTLPQTP FREDQGRLDV ENFYYAQEDE VFAAAKRDGF SWSVHRPHTV IGKAVGNAMN
MGTTLAVYAT LCRETGRPFR FPGSSVQWNG LTDMTDAGVL AEQLLWAATT PQCRNQAFNV
VNGDIFRWSW MWGRIANWFG LEPAPFDGTI LPLEQQMAED AAIWRELAER HGLIEKDLSR
LASPWHTDAD LGRPIEVVTD MSKSRVMGFD RYQPTDEAFF TLFGQLRGER LIP
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