| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3772 |
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| Symbol | |
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| ID | 7388227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3138601 |
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| End bp | 3139410 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643652543 |
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| Product | O-linked GlcNAc transferase |
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| Protein accession | YP_002550724 |
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| Protein GI | 222149767 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGCTC TCGGCCTCAC CGCCATGCTG ACGCTTTCCG GATGCCAATC CACCAACCAG
TCAAGCGACA TGATCAGCAT CGACCGCGAT CAGGGGTCTA AGGAAAATAT TTCCTCGCTG
TCGTCGGTGA TCGCCGCCAA TCCACGCGAC CCAGGCGGCT ATAACGTGCG GGGCTCTGCC
TATGGCCGGG CTGGCGAATT CCAGAAGGCG CTGGCGGATT TCAACACCGC GCTGCAACTC
AACCCGAATT TCTACCAGGC CTATGCCAAC CGCGCCCTTG TCTATCGCAA CATGGGCAAG
CCGGTCGAAG CCGCCAATGA TTATACCGCT GCCCTGAAGA TCAATAGCAG CTATGATGTC
GCCTATATCG GCCGTGGCAA TATCTACCGC CAGGCGGGCC GGGTAGATGA GGCATTTCAG
GATTTCTCCA AGGCAATCGA GCTGGATACC ACCGATGGCC GCGCCTATCA CAATCGCGGT
CTGATCTTCC AGTTGCGCGG CCAGCACGAC AAGGCGATCG ACGATTTTTC CAAGGCGCTC
TCACTGTCAC CGAATGCGCC TGAGCCTTAC AACGGTCGTG GCGTAAGCTA TCTGGCGCTG
AACGACGATG AAAACGCCTT TGCCGATTTC AACCATGCCA TCGACATGAA CCCGAAGCTG
GCCGAATCCT GGGCCAATCA GGCCCTGGTC TATGAGCGGC GCGGCGACAA GGTCAAGGCT
GCCAAGTCCT ACGCCCATGC CTTGAGCCTG GATGGAAAAT ACACGCCCGC CCGCGATGGT
CTTGCCCGGA CACGCGGCTC GACAAGCTGA
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| Protein sequence | MLALGLTAML TLSGCQSTNQ SSDMISIDRD QGSKENISSL SSVIAANPRD PGGYNVRGSA
YGRAGEFQKA LADFNTALQL NPNFYQAYAN RALVYRNMGK PVEAANDYTA ALKINSSYDV
AYIGRGNIYR QAGRVDEAFQ DFSKAIELDT TDGRAYHNRG LIFQLRGQHD KAIDDFSKAL
SLSPNAPEPY NGRGVSYLAL NDDENAFADF NHAIDMNPKL AESWANQALV YERRGDKVKA
AKSYAHALSL DGKYTPARDG LARTRGSTS
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