Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3756 |
Symbol | |
ID | 7388214 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 3120501 |
End bp | 3121814 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643652530 |
Product | hypothetical protein |
Protein accession | YP_002550711 |
Protein GI | 222149754 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4961] Flp pilus assembly protein TadG |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAGTG CCGGATCAAC GTCACGGATG GACATGATGG TCATTTCGGC GCTTAACCCT GGTTTGCGTG CCTGTCGTTT ACTCGCCACG AAAGCGCGGC AAGCCGGTGC TTTGGCATGC CGCCTGCTCA GGCATAGCGG CGGCAATTTC GGCATGATGA CGGCGGTTCT GCTGCCGGTT TCCATCGGCG TGGCAGGTCT GGCGATGGAC GCGACCGAGA TGGTGCAGTC GAGAAGTGCC TTGCAAAGCT CGGTGGATGC CGCAGCCCTT GCCGCCGCCT CGGCGATGAG CAACGGCATG AGCGAGGCCG ACGCCATTGC CCTTGCCAAG AGCTTCCTTT CCTCGCAGCT GGCCAATACC ATGGCCAGAG ACGAAAACAC CAGTTCGGTG GACCAGATCA CACAGGCGGA ACCGGATATT TCCGTCAAGA CTACCCAGGT CAACAGCTCA TCGACCTCCT ATGACGTAGA ACTGACAGGC AGCTACACCA TAACGATGAA CCCGCTTTCG AGGGTTTTGG GCTGGGAGAC CGTGACGCTG AAAGCCTATG GCAAGGCCCA GGCCGCGACC ACGGCCTCCG AAAGCCCGCT CTCGATGTAT CTGGTGCTCG ACCGGTCAGG CTCGATGAAT GATGAAACGG CGACGACCTA CACGGGGACC TGCACCAAAA CCACGACGTC TGGCTATGGG TGGAACAAGA AGACCACGAC GACGAGCTAT AGCTGCACGA AAAACTACAC GAAGATCGAA TCCCTGAAGC TGGCCGTCGC CGATCTGGCC GCACAGCTCA AGAAGGCCGA TCCAAACAGT GAATATGTAC GCACCGGTGC CGATTCCTAC AATGCCAGTG CCGATACCGC CCAGGCGATG AGCTGGGGAA CCGCCAATGT CGTCACCTAC GTCAACGCGC TCAGCGCTAC CGGCGGCACC GATGCCAGGG GCGCGCTGAG TGCTGCCTAT AGCGCGCTGC AAACATCCAA CAAGACAGAG ATTACCGCCC ATAATGTATC AAGCGTCAGC AAGATCGGCC GCTACATTGT GTTCATGACG GACGGCGAAA TGACCGGCAA CAGCAGCAGC TGGAGCTCCA GCATCGACTC TGCTGTGCGC AGCCAATGCA CCAGCATCAA GGCCGACGGC ATCCAGATCT ATACGGTTGC CTTCATGGCA CCAGCCAATG GCAAGTCGCT GCTCAGTGCC TGTGCCAGCG ACGCCTCGCA CTATTATGAG GCGACCGATG CGGCAAGCCT TGTCGCAGCC TTCGGGGAAA TCGGCAAGAA AGCGACCTCC ACCTCGACCC GCCTGATGAA TTGA
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Protein sequence | MTSAGSTSRM DMMVISALNP GLRACRLLAT KARQAGALAC RLLRHSGGNF GMMTAVLLPV SIGVAGLAMD ATEMVQSRSA LQSSVDAAAL AAASAMSNGM SEADAIALAK SFLSSQLANT MARDENTSSV DQITQAEPDI SVKTTQVNSS STSYDVELTG SYTITMNPLS RVLGWETVTL KAYGKAQAAT TASESPLSMY LVLDRSGSMN DETATTYTGT CTKTTTSGYG WNKKTTTTSY SCTKNYTKIE SLKLAVADLA AQLKKADPNS EYVRTGADSY NASADTAQAM SWGTANVVTY VNALSATGGT DARGALSAAY SALQTSNKTE ITAHNVSSVS KIGRYIVFMT DGEMTGNSSS WSSSIDSAVR SQCTSIKADG IQIYTVAFMA PANGKSLLSA CASDASHYYE ATDAASLVAA FGEIGKKATS TSTRLMN
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