| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3754 |
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| Symbol | |
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| ID | 7388212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 3117015 |
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| End bp | 3119429 |
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| Gene Length | 2415 bp |
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| Protein Length | 804 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643652528 |
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| Product | hypothetical protein |
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| Protein accession | YP_002550709 |
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| Protein GI | 222149752 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2307] Uncharacterized protein conserved in bacteria
[COG2308] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAAGC GTACGGCCAT GGAGATGGAC AGGCTGGAGA AGGACCCCGG AGCGGCGTTT
GCCGATGGCT ATCGGTCCTT GCCCGGTGCC GCCGATGAAA TGCTGGACCG GGACGGCAAT
ATCCGTCCGG TCTGGCAGAC TTTCGTCGCC GCCATCAACG GCATGGATGA AGAGCAATTG
CACGAGCGCT TTGCCCGTGC CGACCGCTAT CTGCGCGATG CCGGGGTCTT CTATCGTGCC
TATGGGTCTG CCGGTCCCAC CGAGCGGGCC TGGCCGTTCT CCCATATTCC GGTGCTGATC
GCCGATGCCG AATGGCAGGT TCTGGCGCGC GGCCTGGTGC AGCGGGCCGA ATTGCTGGAA
CAGGTTGTCA CCGATATCTA CAGCGATAAC AGGCTGGTGC AGGAAGGCTT CATTCCGCCG
GCACTGATTG CCGCCAATGG CGAATTTCTG CGGCCTCTGG TCGGGGTGAA ACCAGCAGGT
GGCCATTACC TGCATTTCTG TTCCTTCGAG ATCGGCCGTG GGCCAGATGG CGCCTGGTGG
GTGCTGGCCG ACCGCACCCA GGCACCTTCT GGCGCGGGCT TTGCGCTGGA AAACCGGGTG
GCGACGGCGC GGGCCTTTTC CGATATCTAT GCCGAAACCC ATGTCCACCG GCTTGCCTCG
TTCTTCGGGG CATTTCGTGA TGCGCTTCAG GGCCACAAAC AAAGCCCTGA TGACCGGATC
GCCGTGCTGT CCCCCGGCCC GGCCAATGAA ACCTATTTCG AACACGCCTA TATCGCCCGC
TATCTCGGCA TCATGCTGCT GGAGGGCGAG GATCTGACCG TTGTCAACGG CAAGGTGATG
GTGCGCACCG TGGCCGGGCT GAAGCCGATC GGGGTGCTCT GGCGTCGTCT GGATGCGGCC
TTTGCCGATC CGCTGGAACT GAACCAACTC AGCCATATCG GCACACCGGG CGTGGTGCAG
GCGCTGCGCA ACCAGGCGGT CACTTTCGTC AACGCGCTCG GCTCCGGCAT TCTCGAAACC
CGGGCGCTGA TGGCCTTCCT GCCGACCATC TGTCGGCATC TGCTGGGTGA GGACCTGTTG
TTGCCCTCAA TTGCCACCTG GTGGTGCGGG CAAAAACAGG AACGCGACCA TGTCGCCCAC
AATATCGAGA AAATGGTGAT CGGTCCGGCC TATTCCCGCC AGCCGTTTTT CGACGACAAC
AGGCAATCGG TGCTCGGCGC GACCTTGCGG GAAACCGCCC AGCACTCGAT TGCCAGCTGG
CTGGAAACCG ACGGCGCCAA GCTGGTCGGT CAGGAAGCCG TGACGCTCTC CACCACCCCC
GCCATGGTCG ATGGTAGACT GCAACCGAGG CCGATGAGCT TGCGGGTGTT TGCGGCACGC
ACCAAGGACG GCTGGCAGAT CATGCCGGGC GGGTTTGGGC GGATCGGCAG CGGCAGCGAT
GTGGCGGCGA TGGCCATGCA GGCCGGCGGG TCTGCCGCCG ATGTGTGGAT CGTTTCCGAA
AAGCCGGTCG AGCGGATCAC GCTGCTGCCA GCCGAAGAAC AATTTACCCG CAACATGCCA
GGCAGCCTGC CCAGCCGCGC CGCCGACAAC CTGTTCTGGC TTGGTCGCTA TATCGAGCGG
GCCGAAGGGG CGCTGCGAAT CCTTCGTGCC TGGAATGCCC GCTTTGCCGA AACAGCTGAT
CCGAAACAGC CGCTTCTGGC CTTTGTCAGC GAATATCTGG AAGCACTGGA CATCAATACA
GACCAGGGCG TGCCGGAAAG CCTGCTCGGC AATATCAACA GCGCGGTCTA TTCCGCCAGC
AATATCCGCG ACCGGTTCTC GCCGGATGGC TGGCTGGCGC TGAATGATCT GGCCAAGACC
GCGCGCCGCT TTCACGAAAA GATCAAGCCG GGCGACGACG CCTCGCATGC CATGACCATC
CTGCTGCGCA AGCTGGCGGG TTTTGCCGGT CTGGTGCATG AAAACATGTA TCGCTTCACC
GGCTGGCGCT TCCTCGCCAT CGGCCGCTAT CTGGAACGCG GTATGCATAT GACCCGGTTG
CTTGGCCATA TGGCGGGGCA GGACGCACCA GACGGGGCGC TCGACATGCT GCTGGAGATT
GGCGACAACG TCATGACCCA TCGGCGGCGC TATAACGTCA ACACCGCCCA CCTGACCGTG
ACCGATCTTC TGGCGCTCGA CCCGCTCAAC CCGCGCTCCA TCCTGTTTCA ACTCAACGAG
ATCCACAACG AAGTGGAACA ATTGCCCAAT GCCAAGGTCA ACGGCCAGAT GTCGCGATTC
CTGCGCGAAA CCGTCCGGCT GCACTCAAGC GTGGCGGTAA TGACACCGGA AATGATGACG
CCTGATATCT ACAATCATCT GGAAAAAGAA CTGGAATTGC TGTCAGATCT TTTGGCGCAA
ACCTACCTCG GATGA
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| Protein sequence | MTKRTAMEMD RLEKDPGAAF ADGYRSLPGA ADEMLDRDGN IRPVWQTFVA AINGMDEEQL
HERFARADRY LRDAGVFYRA YGSAGPTERA WPFSHIPVLI ADAEWQVLAR GLVQRAELLE
QVVTDIYSDN RLVQEGFIPP ALIAANGEFL RPLVGVKPAG GHYLHFCSFE IGRGPDGAWW
VLADRTQAPS GAGFALENRV ATARAFSDIY AETHVHRLAS FFGAFRDALQ GHKQSPDDRI
AVLSPGPANE TYFEHAYIAR YLGIMLLEGE DLTVVNGKVM VRTVAGLKPI GVLWRRLDAA
FADPLELNQL SHIGTPGVVQ ALRNQAVTFV NALGSGILET RALMAFLPTI CRHLLGEDLL
LPSIATWWCG QKQERDHVAH NIEKMVIGPA YSRQPFFDDN RQSVLGATLR ETAQHSIASW
LETDGAKLVG QEAVTLSTTP AMVDGRLQPR PMSLRVFAAR TKDGWQIMPG GFGRIGSGSD
VAAMAMQAGG SAADVWIVSE KPVERITLLP AEEQFTRNMP GSLPSRAADN LFWLGRYIER
AEGALRILRA WNARFAETAD PKQPLLAFVS EYLEALDINT DQGVPESLLG NINSAVYSAS
NIRDRFSPDG WLALNDLAKT ARRFHEKIKP GDDASHAMTI LLRKLAGFAG LVHENMYRFT
GWRFLAIGRY LERGMHMTRL LGHMAGQDAP DGALDMLLEI GDNVMTHRRR YNVNTAHLTV
TDLLALDPLN PRSILFQLNE IHNEVEQLPN AKVNGQMSRF LRETVRLHSS VAVMTPEMMT
PDIYNHLEKE LELLSDLLAQ TYLG
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