Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3719 |
Symbol | exsB |
ID | 7388189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 3083184 |
End bp | 3083891 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643652504 |
Product | succinoglycan biosynthesis regulator |
Protein accession | YP_002550686 |
Protein GI | 222149729 |
COG category | [R] General function prediction only |
COG ID | [COG0603] Predicted PP-loop superfamily ATPase |
TIGRFAM ID | [TIGR00364] exsB protein |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.351493 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAC TCGTCGTCTG CTCTGGCGGA CTCGATTCCG TTTCGCTTGC CGACAAAATG GCAGCGGAGC ATGAGTTGAT CGGCCTGATC TCCTTCGATT ACGGCCAGCG TCATAAAAAA GAGCTGGATT TTGCAGCACT CGCGGCCAAG CGGCTGGGTG TGCCGCACCA GATCATCGAC ATGACCAATA TTGGTGCCAG CCTGACCGGC TCGGCCCTCA CAGACGATCT TGACGTGCCC GATGGCCATT ATGCCGAGGA GACGATGAAG ATCACCGTCG TGCCGAACCG CAATGCCATT ATGCTGGCGA TTGCCTTCGG GGTGGCTGCG GCGAAGAAGG CTGATGCGGT CGCCTTGGCC GTGCATGGCG GCGACCACTT CATCTATCCC GATTGCCGAC CCGGCTTCAT TGATGCGTTC CAGATCATGC AGGCCCATGC GCTGGAGGGC TATGCCGATG TCAAATTGCT GGCCCCGTTC GTGACGGTCT CCAAGGCCGA TATCGTCACC GAGGGCGCGA AATACGGCAC GCCGTTTGAC CAGACGTGGT CCTGCTACAA GGGCGGTGCG CGTCATTGCG GGCGGTGCGG CACCTGTGTG GAGCGGCGCG AAGCCTTTCA TCTGGCCGGT GTCACCGATC CTACCGACTA CGAAGACCCG GATTTCTGGG TCAGCGCCAC CTCCGGCTTC CAGGCCAGGG AGGTCTGA
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Protein sequence | MKILVVCSGG LDSVSLADKM AAEHELIGLI SFDYGQRHKK ELDFAALAAK RLGVPHQIID MTNIGASLTG SALTDDLDVP DGHYAEETMK ITVVPNRNAI MLAIAFGVAA AKKADAVALA VHGGDHFIYP DCRPGFIDAF QIMQAHALEG YADVKLLAPF VTVSKADIVT EGAKYGTPFD QTWSCYKGGA RHCGRCGTCV ERREAFHLAG VTDPTDYEDP DFWVSATSGF QAREV
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