| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3642 |
|---|
| Symbol | |
|---|
| ID | 7388055 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | + |
|---|
| Start bp | 3026660 |
|---|
| End bp | 3027025 |
|---|
| Gene Length | 366 bp |
|---|
| Protein Length | 121 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643652453 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002550635 |
|---|
| Protein GI | 222149678 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3027] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.625199 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACAAG TCACGGTCAC CATCGATGGA AAAGCCTATC GCATGGCCTG CGAGGAAGGG
CAGGAAAACC ACCTGACCGA TCTGGCCAGC CAGTTCGACC GTTATGTCAG CCATCTCAAA
AGCCAGTTTG GCGAAATCGG CGACCTGCGC GTCACCGTGA TGGCGGGCAT CATGGTGATG
GACGAATTGT CCGAGTTGAA ACGCCGGATT GCCGCCGCCG AAGCCACCTC CGCTGGCGCC
ATTGGCCGCG AAGACGACAT CCTCGCCGCC ATCATGGAAT TGACGGAACG CCTCAACGGC
CTGACCCGCA AACTGACCGA AAAGCCACAG GCTGCGGCCA GCCCGACGGA AAACCAGCAC
CACTGA
|
|---|
| Protein sequence | MAQVTVTIDG KAYRMACEEG QENHLTDLAS QFDRYVSHLK SQFGEIGDLR VTVMAGIMVM
DELSELKRRI AAAEATSAGA IGREDDILAA IMELTERLNG LTRKLTEKPQ AAASPTENQH
H
|
|---|
| |