Gene Avi_3605 details

Gene Information

• Locus tag: Avi_3605
• Symbol: ruvA
• ID: 7388029
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 2997821
• End bp: 2998438
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 643652427
• Product: Holliday junction DNA helicase RuvA
• Protein accession: YP_002550609
• Protein GI: 222149652
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0632] Holliday junction resolvasome, DNA-binding subunit
• TIGRFAM ID: [TIGR00084] Holliday junction DNA helicase, RuvA subunit

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.454124
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTGGCA AGCTCAAAGG CACCATTGAC GAGATCGGCG ACGACCATGT GCTGGTTGAT 
GTGCACGGCG TCTGTTACGT CGCGCATTGT TCGTCCCGCA CCCTGGCGCG GCTGGGGTCT 
CCCGGTGAAG CCATCGTGCT GTTCATCGAG ACCTATGTGC GCGAAGACCA GCTGAAATTG 
TTCGGCTTCA TGAGCGCGCT GGAGCGGGAA TGGTTCAATC TCCTGCAAAG CGTGCAGGGC 
GTCGGTGCCA AGGTGGCGCT GGCGATTTTG GCCACCCTCA CCCCTTCCGA ACTGGCCAAT 
GCCATTGCTC TCCAGGACAA ACCCGCCATT GCCAGAGCCC CCGGCGTCGG CCCGAAAGTG 
GCGCTGCGTC TTGTCACCGA ATTGAAGAAC AAGGCTCCGG CCTTCACCGG GGATGCGGGA 
AGCGCCATCG GCCTCAAGCA GGAACTGGGT GAAGGGGTTG CCTCCGCCCC GGTTTCCGAC 
GCAGTGTCAG CCTTGACCAA TCTCGGCTAT TCCCGCGACC AGGCCGCCAA TGCCATCGCC 
GCCGCCTTGA AAAATGGCGG TGAAGGCGCC GACAGTGCCA AGCTGATCCG GCTGGGTTTG 
AAGGAGCTGT CGCGGTGA 

 

Protein sequence

MIGKLKGTID EIGDDHVLVD VHGVCYVAHC SSRTLARLGS PGEAIVLFIE TYVREDQLKL 
FGFMSALERE WFNLLQSVQG VGAKVALAIL ATLTPSELAN AIALQDKPAI ARAPGVGPKV 
ALRLVTELKN KAPAFTGDAG SAIGLKQELG EGVASAPVSD AVSALTNLGY SRDQAANAIA 
AALKNGGEGA DSAKLIRLGL KELSR