| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3602 |
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| Symbol | |
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| ID | 7388026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2995108 |
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| End bp | 2995926 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643652424 |
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| Product | outer surface protein |
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| Protein accession | YP_002550606 |
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| Protein GI | 222149649 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3637] Opacity protein and related surface antigens |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0165827 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAC ATCTATTGGC ATTGTTTGCC GCCGGCATTC TGGCCGGTCC GGTAAGCGCC
GCCGACGTCT ATCAGCCAGA ACCGCCGCCG CAGGACGCTC CCGAAGTGAG GGTTGCCGAT
ACGTCCGGCT GGTATCTGCG TGGCGATATC GGCTATTCCT TCAACCAGTT GCGTGGTGCG
AAATTCTATC AGGGCTCGAA TGCCAATCAG GCCAGTTTCG ACCGGCATGA TCTCGATAAC
AGCTATACGC TGGGCGCCGG TGTCGGATAC CAGATCAACA GTCATCTGCG CACCGATGTA
ACCTTCGACT ATCTCGGCAA GTCGGATTTC ACCGGCTCCA CCCGTGGGTC CTGCGGTGTC
TCAAGCGCCT GTACTTCGCG TGATCTGTCC TCCTTGCAGG CCTATACGCT GATGGCCAAT
GCCTATGTGG ATCTCGGCAC CTATGCCTCG TTCACGCCCT ATGTCGGCGC CGGTATCGGC
GGGTCCTACG TCAAGTGGGA CAAGCTGAAA AACACCTCCT GCGCCGATGA CGGCAGTGGT
TGCGATGGCA GCGAAGAACA TGGGGGCCGG GGTAGCTGGC GCTTTGCCTA TCAGCTGATG
TTTGGCACCT CCATCGATCT CACCTGCGAC TGGAAAGCCG ATATCGGCTA CCGCTTCCGC
CAGACGACGG GTGGCAGCAT GTTCGGCTAC AAGGCCAATG GCGGTCCCGG CAGTGACAAG
GGCTTTTACA GCCACGACCT GCATGTCGGC GCCCGCTATC AGTTTGGTGG CTGCCCGACG
CCGGTCGCCT ATGAGCCGCC ACCTCTCGTG TATAAGTGA
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| Protein sequence | MKRHLLALFA AGILAGPVSA ADVYQPEPPP QDAPEVRVAD TSGWYLRGDI GYSFNQLRGA
KFYQGSNANQ ASFDRHDLDN SYTLGAGVGY QINSHLRTDV TFDYLGKSDF TGSTRGSCGV
SSACTSRDLS SLQAYTLMAN AYVDLGTYAS FTPYVGAGIG GSYVKWDKLK NTSCADDGSG
CDGSEEHGGR GSWRFAYQLM FGTSIDLTCD WKADIGYRFR QTTGGSMFGY KANGGPGSDK
GFYSHDLHVG ARYQFGGCPT PVAYEPPPLV YK
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