| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3578 |
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| Symbol | |
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| ID | 7388011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2976503 |
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| End bp | 2976883 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643652409 |
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| Product | hypothetical protein |
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| Protein accession | YP_002550591 |
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| Protein GI | 222149634 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3791] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0728656 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCATAAGG GATCATGTCT TTGCGGCGCT GTTCGCTTTC AAGTGAACGG TGATTTACCG
CCGCCGGATG CTTGTCATTG TTCTAAATGC CGTAAGCATT CCGGCCATTA TTTTGCCTCG
GCCGATGTGC CAAAAGACAA AATAGAGATC CATGGCAGTG ACTTTGTCAG TTGGTATCAG
TCCTCGGAAA AGGTACGACG CGGCTTCTGC TCAGTCTGCG GAACGTCGCT GTTCTTCGAT
CCGCCAGCAA GAGACTGGAT CGCCGTTGCC ATGGGCGCTT TCGATGGTCC CACCCAGACG
CGGCTCAAAA TGCATATCTT CGTTGCCGAC AAGGGTGACT ATTACGATAT CGCTGACGGT
TTGCCGCAGA ACGAGCAATA G
|
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| Protein sequence | MHKGSCLCGA VRFQVNGDLP PPDACHCSKC RKHSGHYFAS ADVPKDKIEI HGSDFVSWYQ
SSEKVRRGFC SVCGTSLFFD PPARDWIAVA MGAFDGPTQT RLKMHIFVAD KGDYYDIADG
LPQNEQ
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