| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3540 |
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| Symbol | arsB |
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| ID | 7388806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2933754 |
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| End bp | 2935028 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643652374 |
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| Product | arsenical pump membrane protein |
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| Protein accession | YP_002550557 |
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| Protein GI | 222149600 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.811733 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCGA CTTACCTGAC CTGGGCTGTT TGCGCCCTTT CCGTTCTGGG CGTTATCAGC
CGGCCCTTTG GCTGGCCGGA GGCGATCTGG GCTGTGCTGG GTGCCATCGT GCTTCTGGGC
CTGGGTGCGA TCGGCTTGGG CGCGATCGGC ATCAACGATG CCTGGGCCGG TGTCGCCAAG
GGTTATGATG TCTACCTGTT CCTGATCGGC ATGATGCTTT TGTCGGAACT GGCGCGGCGC
GAAGGTCTGT TCGATTGGCT GGCGGCGCTG GCGACGCAAA GGGCCAAGGG GTCGCCGCTC
AGGCTGTTCG TGCTGCTCTA TGGTGTCGGC GTCTTGGTCA CTGCCTTTCT CTCCAACGAC
GCGACGGCAG TGGTGCTGAC CCCTGCGGTC TACGCGGCAA CCAAGGCGGC CAGGCTTAAG
AACCCGATGC CCTATCTGCT GATTTGCGCC TTTATCGCCA ATGCGGCGAG TTTTGTGCTG
CCGATTTCCA ATCCGGCCAA TCTGGTGATT TTCGGTGGTG GCGAAATGCC GCCACTCTCC
ACCTGGCTTG CCACATTTGC GCTGCCCTCA CTGGTGGCCA TCGTCGTCAC CTTCGCCATG
CTCTATTGGA GCCAGCGACG CGCCATCCAC GCCGAGGTAA TGGATCAGCA GGTTGAGACG
CCGCATCTCT CCCACAGTGC CAAGCTGGCC GGCTGGGGCC TTATCCTGAC GGCTGTCGTG
CTGATGGCGG CGTCGGCGCT GGGGTTGGAC CTTGGCCTGC CGACCTTTAT TGCCGGGGTG
CTCACCACTG TGCTGGTGCT GGCCTTGAGC GGGCAGGGAC CGGGGGAGAC GCTGAAGGGC
ATGTCCTGGA GCGTGCTGCC GCTGGTGGCG GGCCTGTTCG TGCTGGTCGA AGCGCTGGAC
AAGACCGGGC TGACGGTGCT GCTTGCCCGT TATTTATCCG AGGCCGCCGC AGCCGATGCC
AAGGCTGCGG CCATGGGGGC AGGCCTGCTG GTCGGCTTCC TCTCCAACCT CGTCAACAAT
CTTCCAGCCG GTCTGGTGGC CGGTGCCACG GTGCAGGGCG CCCATGTCGG CAGCACTGTT
TCCGGTGCTA TGCTGATCGG GGTCGATCTT GGCCCCAATC TGTCGGTGAC CGGTTCGCTT
GCCACCATTC TCTGGCTATC GGCGCTCAGG CGCGAAGGCC TGCATATGGG CGCGCTGGAA
TTTCTGAAAA TCGGCGCTGT CGTGATGATC CCGGCCTTGG TCCTGTCGCT GTTGGCGCTG
GTTCTGGTGG CATGA
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| Protein sequence | MTATYLTWAV CALSVLGVIS RPFGWPEAIW AVLGAIVLLG LGAIGLGAIG INDAWAGVAK
GYDVYLFLIG MMLLSELARR EGLFDWLAAL ATQRAKGSPL RLFVLLYGVG VLVTAFLSND
ATAVVLTPAV YAATKAARLK NPMPYLLICA FIANAASFVL PISNPANLVI FGGGEMPPLS
TWLATFALPS LVAIVVTFAM LYWSQRRAIH AEVMDQQVET PHLSHSAKLA GWGLILTAVV
LMAASALGLD LGLPTFIAGV LTTVLVLALS GQGPGETLKG MSWSVLPLVA GLFVLVEALD
KTGLTVLLAR YLSEAAAADA KAAAMGAGLL VGFLSNLVNN LPAGLVAGAT VQGAHVGSTV
SGAMLIGVDL GPNLSVTGSL ATILWLSALR REGLHMGALE FLKIGAVVMI PALVLSLLAL
VLVA
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