Gene Avi_3481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_3481 
Symbol 
ID7388755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp2882251 
End bp2882661 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content57% 
IMG OID643652323 
Producthypothetical protein 
Protein accessionYP_002550506 
Protein GI222149549 
COG category[S] Function unknown 
COG ID[COG3755] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCCTG TTTCGCGGCT GATCATGCTG GCAGGGTTTG GGGTAATGTC GTCTGGCCAT 
GGTGTTCTGG CGCAAGCGCT TGATTGCAAG GACCCGAAAA CCCAGAGCGA TATGACCGCC
TGCGCGGTGC AGGATTTCGA CGCGGCGGAC AAGGCCATGA ATGCCCAATG GAAAATCACC
CGCAAGGTCT TCGTCGAGCA GGATGCAACG CTGGACGATG ACCTCAAAGG GGCTGAAAAG
GCCTTGCTGA AAGCCCAGCG TGCCTGGATC GATTACCGCG ACGGTCAATG TGAGGCCCAG
GGATTTTATG TCCGGGGTGG CACGATGGAG CCCATGGAGG TTGCCGCCTG CAAGGCGGAG
ATGACGAAAA CGCGGACCAA GGAATTGAAA TCCTTGGCTG AAACTCGATA A
 
Protein sequence
MTPVSRLIML AGFGVMSSGH GVLAQALDCK DPKTQSDMTA CAVQDFDAAD KAMNAQWKIT 
RKVFVEQDAT LDDDLKGAEK ALLKAQRAWI DYRDGQCEAQ GFYVRGGTME PMEVAACKAE
MTKTRTKELK SLAETR