| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3452 |
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| Symbol | |
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| ID | 7387055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2856810 |
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| End bp | 2857763 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643652301 |
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| Product | membrane protein |
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| Protein accession | YP_002550484 |
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| Protein GI | 222149527 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACAGCAT CGACGATTTC CCCTGCGCCT CAAAAAGACA CCGCAAAAGA CCGGCACAAC
AGCCATGCCC GTGGCCGCGA GAAACTGAAG GCCCATCTGG CCGTTCTGCT GTTTGCCGTG
TTGCTCGCCA CCTCCTTTTC CTTCGGTGGC ATGGCGACCC ACATGATCGA TCCGATTGCG
GTCCAGGCGC TACGCTATAT CGTCACCATC GCGCTGACCG CTTTCCTGTG CTTCCGCGTC
AAGCGCTATC CGCTCAAAGC GCCGCGTCGC CCGGTCCGCT TCGTGATTAT CGGCGCGCTG
ATGGCCACCT ATATGATCAG CATGTTCATC GCCCTGCAAT TTACCGCCCC TGTGGCGACC
GGGGCGATCT TCACGATGAT GCCGCTGATG AGCGCAGGCT TTGCCTGGCT ATTGATGCGC
CAGAAAACCC GTGGCCGGGT GATGGTCAGC CTGGTGATTG CCGCCATCGG CGCGATCTGG
GTGATCTTTC GCGGCGATGT GCAGGCGCTG ATCCATTTCG ACATCGGCAA GGGTGAGCTG
ATCTACCTCG TCGGCGTCAC CGCGCATGCG ATTTACGTGC CTCTGCTGCG CAAATTCAAC
GAGAACGAAC CGGCGCTGAT CTTCATGCTG TGGTCGGCGG TGGGGACGCT GGCCTTCATT
CTGGTGCCGG GCCTGCCCCG GCTGATCGCC CTCGATTATG CCTCGATCTC CTGGCTTGGC
TGGGGTCTGG TGCTCTATCT GGCTGTGGTG ACGACGCTGA TTACCTTCCT TCTGCTGCAA
TATGCCTCGC AGCGCCTGCC CGCCCCCAAA GTGCTGGCCT ATAGCTATCT GACGCCGAGT
TTCATCATTG TGCTGGAAGG CGCCATGGGC CATGGCTGGG CGCCGATGGC CGTATTTGCC
GGGGCGCTAA TCACCGCCGC CGGACTTCTC GCCATGGCCA TGTTGCCAGA CTGA
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| Protein sequence | MTASTISPAP QKDTAKDRHN SHARGREKLK AHLAVLLFAV LLATSFSFGG MATHMIDPIA
VQALRYIVTI ALTAFLCFRV KRYPLKAPRR PVRFVIIGAL MATYMISMFI ALQFTAPVAT
GAIFTMMPLM SAGFAWLLMR QKTRGRVMVS LVIAAIGAIW VIFRGDVQAL IHFDIGKGEL
IYLVGVTAHA IYVPLLRKFN ENEPALIFML WSAVGTLAFI LVPGLPRLIA LDYASISWLG
WGLVLYLAVV TTLITFLLLQ YASQRLPAPK VLAYSYLTPS FIIVLEGAMG HGWAPMAVFA
GALITAAGLL AMAMLPD
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