Gene Avi_3418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_3418 
Symbol 
ID7387032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand- 
Start bp2830253 
End bp2830834 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content50% 
IMG OID643652277 
Producttranscriptional regulator protein 
Protein accessionYP_002550461 
Protein GI222149504 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTCCC CCTACGGAAA TGCGGAAAAG CGCCTTAAGA TTGTCGAAAC GGCCTACGGC 
TTATTCAAGC GGAACGGATT TCACGCGACT GGAATAGACC GTATCATTGA TGAAGCGGAT 
ATTGCGAAGA TGACGATGTA TCGCCATTTT CCAACTAAAA ATGCGCTTAT TGTCGAGGTT 
TTGCGGTATC GTGCTGCGCG TTTCGAGCGA CAACTGGATG AATTACAAGA AAATGCAAGC 
AGCCCACAGC ACAAGATCGA CGAGATATTC TGTTGGTACG AGCGCTGGTT CAAAACCAGC 
GAGTTTTATG GCTGTGTATT TCAACACGCA CTGGCGGAGT TCAATGATCC GCGCAGTCAA 
GTAAATAAAG CGGCTGTAGC CCAGAAGCTC GGACTGCAGG AACGAATGCG AAGAATCCTC 
TTGGATTGTA TGTCACCTGA ATCTGCGGGC AAGATCGCAA CAGCGCTCCT AATGCTTCTT 
GAGGGCGCAA CATTGCTCGC ACAGATGGGA CAAGGACTGA ACGCGATTGA TGATGCCCGA 
TTAGCTGCTG CTCACCTCGT TAAGTGCGCG GGTGACGCAT GA
 
Protein sequence
MSSPYGNAEK RLKIVETAYG LFKRNGFHAT GIDRIIDEAD IAKMTMYRHF PTKNALIVEV 
LRYRAARFER QLDELQENAS SPQHKIDEIF CWYERWFKTS EFYGCVFQHA LAEFNDPRSQ 
VNKAAVAQKL GLQERMRRIL LDCMSPESAG KIATALLMLL EGATLLAQMG QGLNAIDDAR 
LAAAHLVKCA GDA