| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3376 |
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| Symbol | |
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| ID | 7387001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2794472 |
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| End bp | 2795452 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643652245 |
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| Product | DNA polymerase III subunit epsilon |
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| Protein accession | YP_002550429 |
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| Protein GI | 222149472 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGAAC AGTTTGACAT GTTTTCGGGA GAGGTTTCGC GCGATCGGCT CGCTGTTCGT
GCCAAATCAA GACCCGTGAA GCCTGAGCAG CTGGTCGCTT CCATGAGTGA AGAGGAGATG
GTTCGCCATT TGTCGGAGAC GGGCCGCTAC CGCATCCTCA CAAAACTTAT GCCGCGGGAG
GTCGTACCGT TCCCACGCCC GGAATTCCCG CTCAAAGGCA TCATCCTCGA CACCGAGACC
ACGGGCTTGA ATTGGCGCAA GGATGAGATC ATCGAGATCG GGCTGATCGC GTTCACTTTC
GATTCCAATG GAAACATCGG TGACGTGACC GAGGTCTATG GCGGGCTTCA GCAGCCAAGC
ATGTCTATTC CCGCTGACAT CACGACGCTC ACCGGCATCA CCGACGAGGT GGTCGCCGGT
CAATCGATCG ATATGGAGGT CGTCCAGGCC CTGATCGAAC CCGCGGATTT GGTGATCGCC
CACAATGCCG GTTTTGACCG TCCATTCTGC GAGATGTTGT CTCCGATGTT TGCGGGCAAG
GCCTGGGCCT GCTCGAATGC TGAGATCGAT TGGTCGTCAC GGGGATATGA AGGCACCAAG
CTTGGCTATC TCATCGGGCA GGCGGGTTTC TTCCACGAGG GCCATCGTGC GGTTGACGAT
TGTTTCGCGC TCCTGGAGGT TCTCGCAAGG GACAATGATG GAACGGCCTC CACCGCTTTT
GCTGAACTCT ATCAAGCAAG CCAGCGATCG CGTGTCCGGA TCCTTGCCGA GAATAGCCCC
TTTGACATGA AGGACCACCT GAAAGCGAGA GGCTATCGTT GGTCTGACGG AAGCGACGGT
CGTCCGAAAT CCTGGTGGAT CGAAGTCGAT GAACAGGCGC TAGACGAGGA ACTCTCATAC
CTGCGAACCG AAATCTACCG CTATCCCGAG GCAGATCCAC CGATCAAACG CCTGACTGCC
TTCGACCGTT TTAGGGCTTG A
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| Protein sequence | MTEQFDMFSG EVSRDRLAVR AKSRPVKPEQ LVASMSEEEM VRHLSETGRY RILTKLMPRE
VVPFPRPEFP LKGIILDTET TGLNWRKDEI IEIGLIAFTF DSNGNIGDVT EVYGGLQQPS
MSIPADITTL TGITDEVVAG QSIDMEVVQA LIEPADLVIA HNAGFDRPFC EMLSPMFAGK
AWACSNAEID WSSRGYEGTK LGYLIGQAGF FHEGHRAVDD CFALLEVLAR DNDGTASTAF
AELYQASQRS RVRILAENSP FDMKDHLKAR GYRWSDGSDG RPKSWWIEVD EQALDEELSY
LRTEIYRYPE ADPPIKRLTA FDRFRA
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