| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3369 |
|---|
| Symbol | |
|---|
| ID | 7386996 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | - |
|---|
| Start bp | 2790469 |
|---|
| End bp | 2790804 |
|---|
| Gene Length | 336 bp |
|---|
| Protein Length | 111 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643652240 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002550424 |
|---|
| Protein GI | 222149467 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1733] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0346683 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTGGAAAACT GCCCCATACG CGATGTGCTT CACCGCGTAT CCGACCGCTG GAGCATGCTG
ATCGCTCTGC ACCTCGAAGG GGGGACGCTG CGGTTTTCAG AGCTGAAGCG ATGCATTCCC
GATATTTCGC AGCGGATGCT GTCGCAGACG CTTCGGCGAC TGGAACTGGA TGGCCTTGTC
GAACGCCGGG TCTATCCGGT TGTCCCGCAG CGGGTGGAAT ATGATCTCAC TCCGCTTGGG
CGTTCCTTGT TGGTGCCGTT TCATCTGATG AAAAATTGGG CCGAGGCAAA TCATGCAACG
ATCCGCAAAT CCAGATCGTT GGGGCGTGAT CGTTAA
|
|---|
| Protein sequence | MENCPIRDVL HRVSDRWSML IALHLEGGTL RFSELKRCIP DISQRMLSQT LRRLELDGLV
ERRVYPVVPQ RVEYDLTPLG RSLLVPFHLM KNWAEANHAT IRKSRSLGRD R
|
|---|
| |