| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3360 |
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| Symbol | |
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| ID | 7387507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2779962 |
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| End bp | 2783810 |
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| Gene Length | 3849 bp |
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| Protein Length | 1282 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643652235 |
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| Product | two component sensor kinase/response regulator hybrid |
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| Protein accession | YP_002550419 |
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| Protein GI | 222149462 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.241075 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGCGG CTCGGGCAAC GAAGGGGATT CCATTGCCGA TAGAAGGCGG ATTGCTCACC
ATAGCGTGCG AGAAAATCGC CAGGCTTGAT GTGCCCGCTT TCATCAAGGA TAGCGAGCTT
CGTTTCGTTG CCGTCAATCC CGCCTTTGTC GCATTTTTTG GAGCGGATCT CGATGATCTT
CTCGGACAGC GGGCGGGGGA ACTGACGGAC CGTCCGGAAG ATCTGGCCTG GGAGGATGTC
GAGCGCCGGG CGCTGGTGTT TGCGGAAGAA CATCTGGCTC TGTGTTTCGA TCACAGCGGC
CGCCAGCATT GCCGGGTGCA GATCGAGCGC TTCATCACCG AAGACGAAAT GCCCTATGTC
TTCGGGGTGT TTCGCGAGCG GCCTGGCCGG GTCAAGAGCC GGGGCTGGAA GAAAGAGCCG
CTGCCATCCG GCGCCCAGAT GCCTTCTGCC ATGGCTGAAA TCTCAAGAGA GGTCGCTTCT
CAAGGTGGGA GCGCTGGTGT TGGTAATGGG GCGCCTGGTG CCTGCCTGCC AGCCGATTAT
GCGATGCTTC TCGATCTCAT TCCGCTTGGC GTGCTGCTTC TCGATTCGCA GCTCGATATT
GTCTATTTCA ACACCAGTTT CTCCAGGATG TTGGGTGAGA CAACGGTCGA GCTGAAGTTC
GGCATGAATT TTCAGGCGGT TCTCGACGTT ATCGGAGGTG CGGGGTGGGA TGGGAGTGGT
GAGGATACAT CCGGCCAATT CCTTGCCGCG TCGATAGACG AACCAGAGCC ATGCCAGATC
GCCATGCCGA ACGGACGGGT GATTTCGGCC CGGGGCAACC GCCTGGAAAA CGGTCAGTTT
CTGCTGCTTT ATACCGATGT TACCGAGGCG CAGACCTATG AGCGCGAAAG TACTCTTTAC
CGTGCAGCGT TGGAAAATGT ACCGGAGCCG GTTTTTCTGC GCGATGGCGA CCGGCGGCTG
GTGTTTGCCA ATGCTGCTTA TGAACAAATG CTGGGTGGCG ACCGGACCCG CTTTTATGGC
TTGCGGGAAG ACGAGATGTT TCCTGCCGAA GGCGAGGCCC TGCGCCAGGA GAATATCGAG
GTCCTGGAAA CTGGATGCGC GACGGAGCGC GAACAGCTGA TCATCATGCC CAATGGCGAC
ACCGTGCCCT TGCTGACCAG CCTGAAGCGG ATCGAGACCA AGGATGGCGC GCCTTATATC
GTCGGGACTT TGGCGGATGT TTCGCTGCTG AAGATCGGCG AACGACAATT GCGCGAAGCC
AAGGCGCATG CCGAAAAGCT CTACGACGAT ATAGAGGCCA TTCTGCGCAC CATGCCGGTC
GGGGTGATCA TCCTCGATGC CGATCAGAGT TTAAGTTTTT CCAACCTCAT GGCACGCAAT
ATGGTGTGCT GGCCTGAAGA CCAGGCCATG ACTGGCACAA GTTTCGCGGA TTATCTGCGC
CACGCCCATG CCAATGGCTG GCCACTCGAG ACTGGCGATG ACGCCAGCCT CAACCCTGAT
AGCATCGACC CGGAAAGCCG GATCGCCGCC TATAGTCTTG AATTGCGGAC ATTGACGGCG
GCGCGGCAAA CCGAGGTGAC GCTTTCGGAT CGCCGGCATA TCGTGATTAC GGCATCGCCG
CTGGACGATG GCCAGATCAT GCTGACCTTT TCTGACTATA CCGAGCAGCG GTTGCGCGAG
CGCGAGATAG ACGAGGCCCG TGCCCGGCTG CAGGATGTCG GCAAGCTGTT GGAAGAGGCT
ACCCAACACA TGGCCCAGGG GCTCTGTGTT ATCCAGACGG ACCGTATCCT TTACCGCAAC
GATAAATTGG CGGAAATATT GAACGTGTCG CCGCATCTGG TGCGCACAGG GGCGGATTGG
CGCCAGCTTT TCGATTACTG CGCCGAGCGA GGCGATTTCG GCGACAATCC AACGGCGTTT
CTCGACCGGA TGCGATCAAG GATGTCCGCT GACACCTCCG CCAGCGTCGT GGTGCAACGG
CGCGATGGTG CCTGGCGCAG TATCGAGGCG ATTGTTAGCG CCGAGGACCG CTGGCTGTTC
GTGATCAGCG ATGCCAGCGA GGCCAAGCAG CGTGAGGCGG AACTGACCAC GCTTGCGGCG
CAGGCCGAGG CGGCGGACAA GGCCAAATCT CGGTTCCTGG CCAATATGAG CCATGAAATC
CGCACGCCGA TGAGCGGCGT GCTGGGCATG ACGGAATTGC TGCTGTCTTC CAATCTCGAT
GCCCGGCAAA AGACCTTTGT CGATGTGATC GTCAAATCCG GGCGCTCGCT GCTGACCATT
ATCAATGACA TCATCGATTT CTCGAAGATC GATGACGGGA GCCTGTCCTT GCGCTCGGCC
CCCTTCGATC CGCTGGCGGC GGTGGAGGAT GTGGTCACCT TGATGGCTGG GCGCGCCGCG
GAAAAGGATG TGGACATCCT GGTGCGCGGT CAGGGCAGGC TGACCCATAT GCTGGCGGGC
GATGCGGGTC GGTTCCGCCA GATTCTCACC AATCTCTTGG GGGAGGCAAT CCGGGCCACC
GACAGAGGCC ATGTGCTGGT CGATCTCGGT TTGCGCCAGG AAGAGCCGGA TCTGGACGTC
ACGCTCCAAA GCCACGGAGA TCCTATTTCT GAAACGAATG CCGAGGTGAG TGACCGCGCC
CGTGCATGGC TGGTTCTGCG GATTGAGGAT ACCGGCCATG GCATGACGCC GGAGCAATGC
CTGATGGCCT TTACCAAATT TTCCCAGATG AATGACGGGG CTTTGCATCA CCGGGATGGG
GCGGGTCTCG GATTTTCGAT TGCCGGTGGG CTTGTCGATC TGTTTGGCGG GACGATCGGG
GTGGAAAGCG CGCCCGGTCG AGGTGCCACC GTGACTGTCA ATCTGCCCTT TGCAATGGCG
GCTGAAAAAC TACCGAGCCT TGCTGGCTTT CATCTGCGCG GTGCCCGGGT CCTGGGTTTT
GAAAGCAATG ATATCAGCTG CGGCATTCTC AATGACCAGC TTTGCCGTTG GGGCTTCGAT
GGCGTGGCAG TTAACGATCC GGCGCTGGCG CTGGCCGTGC TGGAACAGGC CGAGAGCCAG
AAAAGCCCGA TTGAGGTGGT TGTGATCGAT TGCTGCCGGC GCAGCGGCGG CGGGCTGGAT
CTGGTGCGCA AGATCCGCGG TGATCGACGG TTCGATCCGC TGTCGATCAT CCTGCTGGCG
GCGGATGCGC CCTTCAATCT CGACAGAATG GCCGATGGGC TGAATATTCA AGCGCAGCTT
ACTAAGCCGG TGGGTGAAAA CCTGCTGCGC AATGTTGTCA TCGATGTGTT GCGCGGCACG
CGGCGCGGCG CTGTCTCCGG GTTGAGGGCG GAACCGGAGG CTGAGCCGCC TGTGATCTCG
GACGGAGAGC AAGTGGCTCT GATGTCGTCG GGTGTGATGC AGCAGGAGCA GATCGATCTG
CTGGTGCTGG ATGCCGGTGA AGCGGAGCGT CATTTTTTCC ATCAGGCCTT GCAGGCGCTG
GGGGTTGGCC ATGCCTGCGT GGAGGGGGAA AGCGAGGCGC TTGCCCTCTG GCGCCAATGG
CAGCCGGGCA TGATGCTGAT CGATCTCGTT GAGGATCGGG CGCGAGTGCT CGATATGGTC
AGGCAGATCC GTGCCGAGGA AAGCCAGCAG CCACAGACCG CGCTGACCGT GCTGATCGGT
CTTGCGGGCG ATCTTTCCAC CTATGACAAG GCGGCCTGCC ATAAAGCCGG TCTTGATGAT
CTCGTCCTCA AGCCTGTCAG TCCCGACCGT CTCCAGGACT GCATTGCCTA TTGGTTAGGG
GGCGCCGCAG CGCAGACGCA ACCACAGACC CTGGCAGAGG ACCTCGGTGC GAGGCTGACG
GCACTGTAA
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| Protein sequence | MQAARATKGI PLPIEGGLLT IACEKIARLD VPAFIKDSEL RFVAVNPAFV AFFGADLDDL
LGQRAGELTD RPEDLAWEDV ERRALVFAEE HLALCFDHSG RQHCRVQIER FITEDEMPYV
FGVFRERPGR VKSRGWKKEP LPSGAQMPSA MAEISREVAS QGGSAGVGNG APGACLPADY
AMLLDLIPLG VLLLDSQLDI VYFNTSFSRM LGETTVELKF GMNFQAVLDV IGGAGWDGSG
EDTSGQFLAA SIDEPEPCQI AMPNGRVISA RGNRLENGQF LLLYTDVTEA QTYERESTLY
RAALENVPEP VFLRDGDRRL VFANAAYEQM LGGDRTRFYG LREDEMFPAE GEALRQENIE
VLETGCATER EQLIIMPNGD TVPLLTSLKR IETKDGAPYI VGTLADVSLL KIGERQLREA
KAHAEKLYDD IEAILRTMPV GVIILDADQS LSFSNLMARN MVCWPEDQAM TGTSFADYLR
HAHANGWPLE TGDDASLNPD SIDPESRIAA YSLELRTLTA ARQTEVTLSD RRHIVITASP
LDDGQIMLTF SDYTEQRLRE REIDEARARL QDVGKLLEEA TQHMAQGLCV IQTDRILYRN
DKLAEILNVS PHLVRTGADW RQLFDYCAER GDFGDNPTAF LDRMRSRMSA DTSASVVVQR
RDGAWRSIEA IVSAEDRWLF VISDASEAKQ REAELTTLAA QAEAADKAKS RFLANMSHEI
RTPMSGVLGM TELLLSSNLD ARQKTFVDVI VKSGRSLLTI INDIIDFSKI DDGSLSLRSA
PFDPLAAVED VVTLMAGRAA EKDVDILVRG QGRLTHMLAG DAGRFRQILT NLLGEAIRAT
DRGHVLVDLG LRQEEPDLDV TLQSHGDPIS ETNAEVSDRA RAWLVLRIED TGHGMTPEQC
LMAFTKFSQM NDGALHHRDG AGLGFSIAGG LVDLFGGTIG VESAPGRGAT VTVNLPFAMA
AEKLPSLAGF HLRGARVLGF ESNDISCGIL NDQLCRWGFD GVAVNDPALA LAVLEQAESQ
KSPIEVVVID CCRRSGGGLD LVRKIRGDRR FDPLSIILLA ADAPFNLDRM ADGLNIQAQL
TKPVGENLLR NVVIDVLRGT RRGAVSGLRA EPEAEPPVIS DGEQVALMSS GVMQQEQIDL
LVLDAGEAER HFFHQALQAL GVGHACVEGE SEALALWRQW QPGMMLIDLV EDRARVLDMV
RQIRAEESQQ PQTALTVLIG LAGDLSTYDK AACHKAGLDD LVLKPVSPDR LQDCIAYWLG
GAAAQTQPQT LAEDLGARLT AL
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