Gene Avi_3303 details

Gene Information

• Locus tag: Avi_3303
• ID: 7387465
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: -
• Start bp: 2732375
• End bp: 2733046
• Gene Length: 672 bp
• Protein Length: 223 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 643652193
• Product: hypothetical protein
• Protein accession: YP_002550377
• Protein GI: 222149420
• COG category: [S] Function unknown
• COG ID: [COG4649] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.889914
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAATC AGAACGACAG CTTTATCCGC GAAGTCAATG ACGAGCTTCG CTCCGAACAG 
ATGCGCCGTT TCTGGCGGCG TCTGGGGCCA GTGTTCATTG GCATTGCCGT GTTGATCGTG 
GTTGGCACCG CCGGATACCG GCTTTATGAT TATTACACGG ACGACCGTGC CTCCAAGTCC 
GGCGACCGCT TTCTGGCAGC GACCAAGCTG GCGACAGATG GCAAGAATGA TCAGGCGCTG 
AGTGATCTGC AAGCCCTCGA AAAAGACGGG TTCGGCGCTT ATCCGGTGCT GGCCAAGCTT 
CGGGCGGCCT CCCTCATGGC GGAGAAGGGC GATGCCAAAG CGGCCATCGA CGCCTTCACT 
GCCATCGGCA AGGATAACAG TGTTCCGCAG GTGATCCGCG ATGTCGCCCA TATCCGCGCC 
GCCTGGCTGC TGATTGACAA CGGCACCTAT GAACAGGTGT CCACTGAGGT CGAAGCGCTG 
GCGGTTCCCG GCCAGGGCCT GCGCCATTCC GCCCGTGAGG CACTCGGTCT TGCCGCCTAT 
AAGGCTGGCC AGACGGAACG CGCCCGCGAA TGGTTCCAGC AGATCACCGA GGACAGCGAG 
GCACCGCGCA ATGTGGCCAA TCGCGCCCAG ATCATGCTGG ACAATATCGC TGCCGCCGGA 
AAGGCGTCCT GA 

 

Protein sequence

MANQNDSFIR EVNDELRSEQ MRRFWRRLGP VFIGIAVLIV VGTAGYRLYD YYTDDRASKS 
GDRFLAATKL ATDGKNDQAL SDLQALEKDG FGAYPVLAKL RAASLMAEKG DAKAAIDAFT 
AIGKDNSVPQ VIRDVAHIRA AWLLIDNGTY EQVSTEVEAL AVPGQGLRHS AREALGLAAY 
KAGQTERARE WFQQITEDSE APRNVANRAQ IMLDNIAAAG KAS