Gene Avi_3277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_3277 
Symboltdk 
ID7387446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand- 
Start bp2712038 
End bp2712616 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content59% 
IMG OID643652176 
Productthymidine kinase 
Protein accessionYP_002550360 
Protein GI222149403 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1435] Thymidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCAAGC TGTATTTCAA TTATGCCGCC ATGAATGCCG GTAAATCCAC CATGCTGTTG 
CAGGCCTCCT ACAATTATCA GGAGCGCGGT ATGCGCACGG TAATTTTTGT CGCCGCACTG 
GATGATCGAG CCGGGCGCGG GCGGGTCGCT TCCCGCATTG GGCTTTCCAG CCCCGCCGAA 
ACCTTCGAGC CGGGCACCGA TCTGTTTGCC GTGGTCGAGG CCATGCATGC AAGCGAGCCG 
ATTGCCTGCG TTTTTGTCGA CGAGGCCAAT TTTTTGAGCG AGCACCATGT CTGGCAATTG 
GCGCGGATTG CCGACCGCCT GCATATTCCG GTCATGGCCT ATGGCCTGCG CACGGATTTC 
CAGGGCCAGC TGTTTCCGGC CTCTCGGTTG CTGCTGGGGA TTGCCGACGA ATTGCGCGAA 
ATCCGCACGA TCTGCCATTG CGGCCGCAAG GCGACGATGA ATGCCCGCTT CGATGCGAGC 
GGCCAGGTGA TGCGCGAGGG TGCGCAGATC GAAGTTGGCG GCAACGAGAA ATATGTGTCC 
TTCTGCCGCC TGCATTGGGA TGAACTGTTC AATGGGTGA
 
Protein sequence
MAKLYFNYAA MNAGKSTMLL QASYNYQERG MRTVIFVAAL DDRAGRGRVA SRIGLSSPAE 
TFEPGTDLFA VVEAMHASEP IACVFVDEAN FLSEHHVWQL ARIADRLHIP VMAYGLRTDF 
QGQLFPASRL LLGIADELRE IRTICHCGRK ATMNARFDAS GQVMREGAQI EVGGNEKYVS 
FCRLHWDELF NG