| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3247 |
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| Symbol | |
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| ID | 7388167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2683015 |
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| End bp | 2684199 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643652151 |
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| Product | benzoate transport protein |
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| Protein accession | YP_002550335 |
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| Protein GI | 222149378 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3135] Uncharacterized protein involved in benzoate metabolism |
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| TIGRFAM ID | [TIGR00843] benzoate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.760281 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAAAC AATTTTCTCC GCAAAGCCTG TTTATGGGTC TGCTGGTTGC CTTCGTCGGC
TTTGCCAGTT CCTTTGCTGT TATCCTGCAA GGGCTGAAAG GGGTTGGGGC CAGCGATCTG
CAGGCGGCCT CCGGCCTGAT GGCGCTGTCG GTCTCCATGG GTATTTGCGG CCTTATCGTT
TGTCTCAAGA CGCGGATGCC GATTTCCATT GCCTGGTCGA CGCCCGGTGC CGCTCTGCTG
GTCACCGCCG GTGTGCCGCA AGGCGGTTTT TCAGCAGCAG TCGGGGCGTT TCTGGTCTGC
GCCGCGCTGA TCATCATTGC CGGGCTGTTC AAGCCGCTTG GCCGGGCCAT TGGCGCCATT
CCCGCCCCGC TGGCCAATGC CATGCTATCA GGGGTGATCG TCGGCCTTTG CTTTACACCG
TTCAAAGCTA TCGAAGAAAG CCCGCTGCTC GGCCTGCCAA TCCTGCTGGC CTGGGCGATT
GTCGACACCA TCAACAGGCT CTTTGCCGTT CCCGCCGCTC TTGCTGCCTT CGTTCTGGTC
CTGGTGTTCG CCGTTCCCCT GCCCGACGGC GCATTCTCGG CACTGAGTGA CTCCCTCGTG
CCGCCAGTTG CATTCGTGAT GCCGACGTTC ACATTCGCGT CGATGGTTTC CATCGCATTG
CCCCTGTTTA TCGTCACCAT GGCTTCACAG AACATTCCAG GCATCGCCGT GCTGAAAGTG
CATGATTACC ACCCAAGGCC GGGTCCACTT TTCACCATCA CCGGCCTGTT CACCGCCCTT
GCCGCGCCCT TTGGCGGCCA TGCCATTAAT CTCGCCGCCG TCACAGCCGC CATGGCGGCG
GGCCATGATG CCCATGCCGA TCCGCAGCGG CGCTATTGGG CGGCGATGAT CGGCAGCGTG
GGGTATCTGG TCCTCGGCCT TTTGGCCGGC GTCGTCACCT CCTTCGTCGG GCTAGCACCC
CCAATCCTGA TCGAATCGGT CGCGGGTCTG GCGCTGATCG GCGCCTTTTC CGGGTCGATC
GTTTCGGCTT TCCGGGAACC CACGACCCGC GAGGCTGCCG CCGTCACCTT CCTGGTCACC
GCGTCGGGTA TCTCGCTTCT CGGCATTTCC GCCGCCTTCT GGGGATTGAT CGGCGGCCTG
GCCATGCTGG GGCTGACGCG GTTCGCCATC CGGCTGCGGC GCTGA
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| Protein sequence | MLKQFSPQSL FMGLLVAFVG FASSFAVILQ GLKGVGASDL QAASGLMALS VSMGICGLIV
CLKTRMPISI AWSTPGAALL VTAGVPQGGF SAAVGAFLVC AALIIIAGLF KPLGRAIGAI
PAPLANAMLS GVIVGLCFTP FKAIEESPLL GLPILLAWAI VDTINRLFAV PAALAAFVLV
LVFAVPLPDG AFSALSDSLV PPVAFVMPTF TFASMVSIAL PLFIVTMASQ NIPGIAVLKV
HDYHPRPGPL FTITGLFTAL AAPFGGHAIN LAAVTAAMAA GHDAHADPQR RYWAAMIGSV
GYLVLGLLAG VVTSFVGLAP PILIESVAGL ALIGAFSGSI VSAFREPTTR EAAAVTFLVT
ASGISLLGIS AAFWGLIGGL AMLGLTRFAI RLRR
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