| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3231 |
|---|
| Symbol | |
|---|
| ID | 7388155 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | + |
|---|
| Start bp | 2670507 |
|---|
| End bp | 2671469 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643652139 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002550323 |
|---|
| Protein GI | 222149366 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCAGGAT TTGCACCGGA AGCGATCAGA GGGCCTGTTG ACGGACGGAT CGTCGAGAAA
ACCCCGACCG GGGATGTTCT GGCCCGCGCC CGCCAACGCG CTGCCCTCAT TCCCGATTGC
ATGGTGGAAG CCAAGCGGAT CGCCAATACC GTCATTTCCG GCTGGCATGG CCGCAGAAAA
CGCGGCATTG GCGAAAATTT CTGGCAGTTC CGCCCCTATG CGGAGGGCGA AAGCCTGGCC
GGAATCGATT GGCGCCGCTC GGCCCGCGAC GATCATCTCT ATATCCGCGA CCGCGAATGG
GAAGCGGCCC ACACGATCTG GCTTTGGGCC GATCTGTCGC CTTCAATGAT GTATAAATCC
CGCTTCGGCA GTGTTTCCAA GGAAAGCCGG GCGCTGGTGC TGATGCTGGC GCTGGCCGAA
GTGCTGGCAC GGTCCGGCGA GCGTATCGGC TGCCCCGGCA TCATGGAACC GATTTCCGCC
CGCAACGCCT CCGAGCGGCT GGCGGCAGCG CTGATCCATG CGCCGGACCT GAGCGGCCTG
CCCAATCAGG GCTTTCCCGA TACCGCCATG ATCCGCAATG CCAGCGATAT CGTGCTGATC
GGTGATTTTC TTGATGATCC CGATGCGATT ATGGCGGGCA TTGCACCGCT GGCCCAGCGC
GGGTTGCGCG GCCATGTCAT CGAGGTTGCC GATCCGGCGG AAGAACTGTT TCCCTATGCG
GGCCGCACCG AATTTACCGA CCCGGAAACC GGCGAAAAGC TGGTATCAGG TCGCGCCGAA
AACATCCGGG AAGACTATCG CCGCGCCTAT TTCCTGCGCC GTGAAGCCTT GAGCGAGGAA
TTGCGGCGGC TGGGCTGGAG CTTTACTGCG CATCTCACCG ACCGGCTGGC CTCCGAAGCG
CTGGTCAAAG TGCATATGCA TTTGTCTGGC GCTCCGCAGC TTTCCCACCG TGGAGGCGCG
TAA
|
|---|
| Protein sequence | MAGFAPEAIR GPVDGRIVEK TPTGDVLARA RQRAALIPDC MVEAKRIANT VISGWHGRRK
RGIGENFWQF RPYAEGESLA GIDWRRSARD DHLYIRDREW EAAHTIWLWA DLSPSMMYKS
RFGSVSKESR ALVLMLALAE VLARSGERIG CPGIMEPISA RNASERLAAA LIHAPDLSGL
PNQGFPDTAM IRNASDIVLI GDFLDDPDAI MAGIAPLAQR GLRGHVIEVA DPAEELFPYA
GRTEFTDPET GEKLVSGRAE NIREDYRRAY FLRREALSEE LRRLGWSFTA HLTDRLASEA
LVKVHMHLSG APQLSHRGGA
|
|---|
| |