| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3190 |
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| Symbol | pth |
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| ID | 7388127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2642934 |
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| End bp | 2643638 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643652111 |
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| Product | peptidyl-tRNA hydrolase |
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| Protein accession | YP_002550295 |
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| Protein GI | 222149338 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0193] Peptidyl-tRNA hydrolase |
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| TIGRFAM ID | [TIGR00447] peptidyl-tRNA hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.29139 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCGTTC TTGCAGGGCT TGGCAATCCC GGCTCCCAAT ATGCCGGCAA CCGCCACAAT
ATCGGCTTCA TGGCGCTCGA CGCCATCCAT CGCCGCCACA GCTTTTCGCC CTGGTCGAAG
AAATTCAAGG CCGAGATTGC CGATGGCACG CTGGCGGGCG AAAAAGTGCT GCTGATCAAG
CCGCAGACCT TCATGAACCT GTCGGGCGAA TCGGTCGGCG AAGCGCTGCG CTTCTACAAG
CTTGGCCCCG AACAGCTGGT AGCGATCTAT GACGAGCTGG ATCTTCTGCC CGGCAAGGCC
CGCATCAAGC TGGGCGGCGG CCATGGCGGC CATAATGGCA TCAAATCGCT GGATGCCCAT
TGCGGCCTGA ACTACCGCCG CCTGCGGCTC GGCATCGGCC ATCCCGGCGA TAAATCTCGG
GTCCAGGCGC ATGTGCTGGG CGATTTCGGC AAGCTCGACG CCGAATGGCT GGATCCTCTG
CTGGAAACGC TGGCCGAAAA CGCCGACATG CTAGTGCGCG GTGAAGACAG CCAGTTGATG
AACAAACTAG CGCTTGCGAC AGGGACGAAA GCGGACGAGG AAAAGCCCAA GCCGGCCAAA
TCCCACATTC ATCAGGCTCG CAATGGGGTC CAGCCCAAAA AGCTGCCGGA AACCGGGCCG
ATGGCGGAGA TGTTGAAGAA GATGTTTGGG CCGAAGAAGG ATTAG
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| Protein sequence | MIVLAGLGNP GSQYAGNRHN IGFMALDAIH RRHSFSPWSK KFKAEIADGT LAGEKVLLIK
PQTFMNLSGE SVGEALRFYK LGPEQLVAIY DELDLLPGKA RIKLGGGHGG HNGIKSLDAH
CGLNYRRLRL GIGHPGDKSR VQAHVLGDFG KLDAEWLDPL LETLAENADM LVRGEDSQLM
NKLALATGTK ADEEKPKPAK SHIHQARNGV QPKKLPETGP MAEMLKKMFG PKKD
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