Gene Avi_3167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_3167 
SymbolcsaA 
ID7388110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp2623751 
End bp2624110 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content58% 
IMG OID643652094 
Productsecretion chaperone 
Protein accessionYP_002550278 
Protein GI222149321 
COG category[R] General function prediction only 
COG ID[COG0073] EMAP domain 
TIGRFAM ID[TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain
[TIGR02222] export-related chaperone CsaA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.52131 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCGGGA CGGAAAAATC CTCCGACGAG ATCACTTATG GCGATTTCGA AAAAGTCGAT 
ATCCGGGTCG GGACGATCAT CGAGGCAGAG CCTTTTCCTG AGGCCCGCAA GCCAGCCTAC
AAGCTGCGGA TTGATTTCGG CCCTGAGATC GGCATCAAGC GGTCATCGGC GCAGATCACC
GTACATTATA CGCCGGAAAG CCTTGTTGGT CGCCAAGTGC TCGGCGTGGT CAATTTTCCG
CCGCGCCAGA TCGGGTCTGT GCGGTCCGAG GTTCTCACCC TTGGTTTCGA GGATGAGGCC
GGAGCCATCG TGCTGGCTTC GGTGGAGCGC GGCGTTCCGA ATGGGCGCAA AATGATGTAG
 
Protein sequence
MSGTEKSSDE ITYGDFEKVD IRVGTIIEAE PFPEARKPAY KLRIDFGPEI GIKRSSAQIT 
VHYTPESLVG RQVLGVVNFP PRQIGSVRSE VLTLGFEDEA GAIVLASVER GVPNGRKMM