Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3167 |
Symbol | csaA |
ID | 7388110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 2623751 |
End bp | 2624110 |
Gene Length | 360 bp |
Protein Length | 119 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643652094 |
Product | secretion chaperone |
Protein accession | YP_002550278 |
Protein GI | 222149321 |
COG category | [R] General function prediction only |
COG ID | [COG0073] EMAP domain |
TIGRFAM ID | [TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain [TIGR02222] export-related chaperone CsaA |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.52131 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGCGGGA CGGAAAAATC CTCCGACGAG ATCACTTATG GCGATTTCGA AAAAGTCGAT ATCCGGGTCG GGACGATCAT CGAGGCAGAG CCTTTTCCTG AGGCCCGCAA GCCAGCCTAC AAGCTGCGGA TTGATTTCGG CCCTGAGATC GGCATCAAGC GGTCATCGGC GCAGATCACC GTACATTATA CGCCGGAAAG CCTTGTTGGT CGCCAAGTGC TCGGCGTGGT CAATTTTCCG CCGCGCCAGA TCGGGTCTGT GCGGTCCGAG GTTCTCACCC TTGGTTTCGA GGATGAGGCC GGAGCCATCG TGCTGGCTTC GGTGGAGCGC GGCGTTCCGA ATGGGCGCAA AATGATGTAG
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Protein sequence | MSGTEKSSDE ITYGDFEKVD IRVGTIIEAE PFPEARKPAY KLRIDFGPEI GIKRSSAQIT VHYTPESLVG RQVLGVVNFP PRQIGSVRSE VLTLGFEDEA GAIVLASVER GVPNGRKMM
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