| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3149 |
|---|
| Symbol | |
|---|
| ID | 7388101 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | + |
|---|
| Start bp | 2614595 |
|---|
| End bp | 2615800 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 643652085 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002550269 |
|---|
| Protein GI | 222149312 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4645] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.717167 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGGAT ATTTCCTCGT CTTCATGATG TTGAACCACC TGATCTTCAC GGGCGGCTAT
CTGCTGGTAG AGGTCAATCA CCGCAACCTG ACATTCGTCG AGGATGCGCA GGGCTTCGTG
TTCATGTCCG GCCTGCTGGT CGGCATGGTC TATGGCCGCA AGATGCTGAA AAGCGGCTAT
GAAGCGGGGC GCGAGCGGAT CTGGGCGCGG GCGCTGGAAC TTTACCGTTA CGCCATGGGC
ATTATCCTGC TTGTGCTTGC AGCAAGGCTT GTGCTTCCCG GTGCTATAGG GATCTGGCAC
GACTGGCTGG GCGAAGTGTC GCTCAGCGAT CCACTGCGCC TCGCCTCAAT CGCCACATTC
CTGTTCCAGC CGACCTATAT GGATATCCTG CCGCAATATA TCATATACAT GGTGTTTGCG
CCTGTGTTGA TCTGGCTCTG CATTACCGGT CGCTGGGCCA GCGTCGCTAT CGGCTCATTG
GTCGTCTGGA TGGCAGGCCA GCTTGGTCTG CACCGCCTGA TTACCTATCC GCTGGATGCC
TGGCTGGGTG CCGCCGAAAA GGAAGGCATT CGCGCCAGCT TCAACCTGCT GGGCTGGCAG
ATCGTATTTT TCGGCGGCCT GATTGTCGGA AGCCTGACGG CGACGGGCAA TATCAACTGG
AGCAAGGTGT TCAGCCCGGA AAAGACGCTG ATCCCCAAGA CGGCGCTTGC CATCCTCATC
TTCTTCCTGC CACTGCGCAT CATGACCGCC CATGGGCTGA TGCCTGACGT CGTGCTGCAA
AAGTTCGGCA CAATGGAAGT GCGCGCCGAT TTCGGCCCGG TCTATCTGCT GAATTTCGCC
GCCATGGCCA GCCTGGTTGC CTGGTTGCTG ATCGCTGGTC CGAAATATGA CAGCGCTATC
GTCCGCAAGA CCGCAAGCGT GGTCAACAGT GTCTTCAGCC TCAGCTTCCT GCAATTGCTG
GGCCGTCACT CCCTGCATGT CTATCTCTGG CATGTTCTGG TCGTGTTCGC TGTGCGCTAT
ATCGACGGCC GGATCGGACC GTTCTCGGAA CTGTCGAAAA CCGCGATTGC CGTGTTCTGC
GTGTCGCTTC TGGCTCTGCC AGCGCTTTAC CGCGAACGCG ACATCCATTT TGCCCCGGCC
CCGCAACCAA AACCGGTTCC GGCCCCTGCC CCTGCCCCAG CAGGAAAGCA GATGCAGAAT
GCTTGA
|
|---|
| Protein sequence | MRGYFLVFMM LNHLIFTGGY LLVEVNHRNL TFVEDAQGFV FMSGLLVGMV YGRKMLKSGY
EAGRERIWAR ALELYRYAMG IILLVLAARL VLPGAIGIWH DWLGEVSLSD PLRLASIATF
LFQPTYMDIL PQYIIYMVFA PVLIWLCITG RWASVAIGSL VVWMAGQLGL HRLITYPLDA
WLGAAEKEGI RASFNLLGWQ IVFFGGLIVG SLTATGNINW SKVFSPEKTL IPKTALAILI
FFLPLRIMTA HGLMPDVVLQ KFGTMEVRAD FGPVYLLNFA AMASLVAWLL IAGPKYDSAI
VRKTASVVNS VFSLSFLQLL GRHSLHVYLW HVLVVFAVRY IDGRIGPFSE LSKTAIAVFC
VSLLALPALY RERDIHFAPA PQPKPVPAPA PAPAGKQMQN A
|
|---|
| |