| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3145 |
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| Symbol | |
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| ID | 7388098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2611622 |
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| End bp | 2612524 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643652082 |
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| Product | transcriptional regulator LysR family |
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| Protein accession | YP_002550266 |
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| Protein GI | 222149309 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.813565 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCAG ATCAACTGAG TTGGGATCTC TACCGCAGTC TTCTCGCCGT AATCACGGAG
GGTTCGCTGT CTGGCGCAGC GCGTCAGCTC GGCCTGACCC AGCCGACAGT CGGTCGCCAT
ATCGAGATGC TGGAGCAGGC TTTTGGCACG CCCTTGTTTG TGCGCAGCCA GCGCGGCTTG
CTGCCAACGG AAACCGCCCT CGCCATGCGC GGCCACGCTG CCCTGATGGC GGCCACCAGC
ACATCGCTGG CGCGCATCGC AGCCGGGGAG CAGGGAGAGG CAGGAGAATT GCGCGGACCG
GTGCGGATCA GCGCCAGCGA AATGATCGCC GTGGAAGTGC TTCCCCCAAT TTTCACCCCC
TTACAGGAGC AGTTTCCCGG GCTGGAAATC GAGCTATCGG CCACTGACCA GATGGAGGAT
CTGCTCCACC GAGAAGTGGA TATTGCCGTG CGTATGGTCG CGCCGACCCA GCTTGCTCTG
ATTAGCCGCC ATATCGGGGC GATTGGCATC GGCTTTTATG CCCATCGGCG CTATCTCGAG
CGTCATGGTA CGCCATCAAG TCTGGCGCAG CTCGCCGAGC ATCGCCTCAT CGGTTTCGAC
CGGCAATTGG CCTATATCAG GGACCTGCTG AGAACCCGCC CGGATCTGGA TGCCCTGCAT
TTTCAGTTCC GCAGCGACAG CAATCTGGCA CAATTTGCAG CCATCCGCGC CGGATTGGGG
ATCGGCATGT GTCAGCCCGG CCTCGCCCGC CGCCATGCGG ATCTCATCGA AGTCCTGCCC
GGAACCCTCG ATATCGCGCT CGACACATTC GTGGTCATGC ATGAGGACCT GAAGCTCAGC
CGCCGCTGCC GGACGGTGTT CGACGCCGTG GTAGAGGGAT TATTGGCCTA TCTGCGCGAA
TGA
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| Protein sequence | MNADQLSWDL YRSLLAVITE GSLSGAARQL GLTQPTVGRH IEMLEQAFGT PLFVRSQRGL
LPTETALAMR GHAALMAATS TSLARIAAGE QGEAGELRGP VRISASEMIA VEVLPPIFTP
LQEQFPGLEI ELSATDQMED LLHREVDIAV RMVAPTQLAL ISRHIGAIGI GFYAHRRYLE
RHGTPSSLAQ LAEHRLIGFD RQLAYIRDLL RTRPDLDALH FQFRSDSNLA QFAAIRAGLG
IGMCQPGLAR RHADLIEVLP GTLDIALDTF VVMHEDLKLS RRCRTVFDAV VEGLLAYLRE
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