| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3129 |
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| Symbol | |
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| ID | 7388667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2600767 |
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| End bp | 2601594 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643652071 |
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| Product | glycosyl transferase |
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| Protein accession | YP_002550255 |
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| Protein GI | 222149298 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3306] Glycosyltransferase involved in LPS biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.537934 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGTGC TGATCATCAA TCTCGACCGC GCCCGTGAGC GTCTAGCCTT CCAGCAAGCG
CAGATGCGCG CTCTTGGCCT TTCGTTTACC CGTATAGCAG CCTTGGATGC CGATCATCTT
CCCGATCTGG GCGAGGCCTA TTGGAACGGC TGGGAAAGAC CGATTCGGCC TGCGGAACGG
GCCTGCCTGC TCAGCCATCG CCAGACCTGG GAGACCATTG CCGCAGGCGC AGACCCCGTG
CTGGTGCTGG AAGACGATGC GGTTCTGTCC GATAAAGTGC CTGCTCTTCT GGAAGCACTG
CGCCATCGAA CCGATCTCGA CCATGTGACG CTGGAAACGC GCAGCCGCAA AAAACTTGTC
GCTCGCGCCA GCCTCTCCGA TCTGCCACTG CGCCGACTCT ATCAGGATCG CTCGGGGGCC
GCGGCCTATA TTCTCTGGCC AACGGGAGCT GCCAAGCTTC TCCAGCGCAG TGCACGCCAC
GGTGCCATTG CCGATGCGGT GATCTGCGCG GCCTATGAGC TTGCCTCCTT CCAGGCCGAT
CCAGCGCTGG CCGTGCAACT GGATCGCTGC GCGCCCTATG GCCTGCCTAA ACCGATTGCG
ACCCAGTCGT CGATTTCGCC CACTCAATCA GAAAAGCAGC GCCCCTCCCT CGCCTTTCGG
CTCAGGCGGA TCAAGGCCCA GTTGCGAATG GGCCTGCGTC AGCTTTGCCA CAGCCAGGAT
GCGCAGCGAC GGCAGGTGCC GGTCCGGCGC GAGGATTTCG ACTATCTGAA GACCTTGGCG
GTCACTCAGA CCACCAGCCC GTCCGCCCCC GGTGATGCTG CGCCTTGA
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| Protein sequence | MQVLIINLDR ARERLAFQQA QMRALGLSFT RIAALDADHL PDLGEAYWNG WERPIRPAER
ACLLSHRQTW ETIAAGADPV LVLEDDAVLS DKVPALLEAL RHRTDLDHVT LETRSRKKLV
ARASLSDLPL RRLYQDRSGA AAYILWPTGA AKLLQRSARH GAIADAVICA AYELASFQAD
PALAVQLDRC APYGLPKPIA TQSSISPTQS EKQRPSLAFR LRRIKAQLRM GLRQLCHSQD
AQRRQVPVRR EDFDYLKTLA VTQTTSPSAP GDAAP
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