| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3113 |
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| Symbol | |
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| ID | 7388658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2588417 |
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| End bp | 2589319 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643652062 |
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| Product | transcriptional regulator LysR family |
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| Protein accession | YP_002550246 |
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| Protein GI | 222149289 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.498729 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGATC TGCCGCTCGC CGATCTCGAT GCCTTCGCCA CCATTGCCCG GTTGAGAAAC
TTCCGGGCAG CCGGAAAGTT GCGCGGTGTT TCGGCCTCGT CATTGAGCGA GGCGATGCGG
CGGCTGGAGG CGCGGGTTGG CGTGCGGCTG CTGAACCGCA CCACCCGCAG CGTGACCCTG
ACCGATGCCG GAGCGCGGCT GTTGGAACGG TTGTCGCCGA CGCTGGCCGA TATCGAGCTG
GCACTTGACG ATATCAACCA GTTTCGCGAG CGCCCCTTCG GACGGTTACG GCTTAACGTG
CCGGGTATCG TCGCCCGCTG TGTGCTGCCG CCTGTTGTGA CCGGTTTTCT GGCCGCCTAT
CCAGACATTT TGCTGGAGGT GACTGTCAAC GATGCTTTGA TCGACGTGCT GGCTGAAGGC
TGCGATGCGG GCATCCGCTA TGAAGAGGCG CTGCATCAGG ACATGATCGC GGTTCCCATT
GGCCCGCGCC GCCAGCGCTA TGTTTGCGTG GCAGCACCGT CTTATCTTGA GCAGTACGGC
AGACCGGAAC ATCCGCGCGA CCTGATCCAT CACCGCTCCA TTCTGCATCG TTTCAACAGT
GGCCGGGTGA ATGAATGGCA TTTCGAACGC GAGGGTGAGG CGATCAATGT CTCCCCGCCA
CCCCGGTTGA TCGCCGAGAC GGTCGATCTC GAACTGGCCG CAGTGCGGGC CGGACTTGGC
ATGATGGGCA CATTCGAGGA CTTCGTGATC GAGGATTTGA ATGCCGGACG GCTGGAGAGG
GTGCTGACCG ATTGGGAGGA CGAGTTTTCC GGTCCCTTCC TCTATTATCA TAGCCGTCGC
CACATGCCCG TACCCTTGCG GGTTTTCGTC GATTATATCC GCCAGCATGG CGATCCCGGT
TGA
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| Protein sequence | MNDLPLADLD AFATIARLRN FRAAGKLRGV SASSLSEAMR RLEARVGVRL LNRTTRSVTL
TDAGARLLER LSPTLADIEL ALDDINQFRE RPFGRLRLNV PGIVARCVLP PVVTGFLAAY
PDILLEVTVN DALIDVLAEG CDAGIRYEEA LHQDMIAVPI GPRRQRYVCV AAPSYLEQYG
RPEHPRDLIH HRSILHRFNS GRVNEWHFER EGEAINVSPP PRLIAETVDL ELAAVRAGLG
MMGTFEDFVI EDLNAGRLER VLTDWEDEFS GPFLYYHSRR HMPVPLRVFV DYIRQHGDPG
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