Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3109 |
Symbol | |
ID | 7388655 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 2584650 |
End bp | 2585105 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643652059 |
Product | hypothetical protein |
Protein accession | YP_002550243 |
Protein GI | 222149286 |
COG category | [S] Function unknown |
COG ID | [COG1610] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTACGCG AGGATCTGAC GACTGCGCTG AAGGAAGCGA TGAAAGCCAA GGATAGCCGC CGGCTTTCCA CCATCCGCTT GGTGCAATCG GCCATCAAGG ACCGCGATAT CGCCAATCGC GGTGAGGGCA AGGATGAGGC CAGCGATGAC GACATCCTCC AGCTGATGGC CAAGCTGGTG AAGCAGCGCG AGGAATCGGC CAAGATTTAC GAAGACAATG CCCGCCCCGA GCTTGCCGCC CAGGAGCGCG AGGAAGTGGC GATCATCAAG GGTTTCATGC CCGAGCAGAT GGATGACGAT AAAGTCCGCG AAGCGATTTC CGGCATTATC ACCGAAATCA GCGCCGAAGG CGTGCGCGAC ATGGGCAAGG TGATGGCCGC TTTGAAAGAA CGCTATGCCG GTCAGATGGA TTTCGCCAAG GCGTCCGGCT TGGTGAAGGA ATTGCTGACG AAGTAA
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Protein sequence | MLREDLTTAL KEAMKAKDSR RLSTIRLVQS AIKDRDIANR GEGKDEASDD DILQLMAKLV KQREESAKIY EDNARPELAA QEREEVAIIK GFMPEQMDDD KVREAISGII TEISAEGVRD MGKVMAALKE RYAGQMDFAK ASGLVKELLT K
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