Gene Avi_3091 details

Gene Information

• Locus tag: Avi_3091
• ID: 7388640
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 2565675
• End bp: 2567717
• Gene Length: 2043 bp
• Protein Length: 680 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 643652044
• Product: hypothetical protein
• Protein accession: YP_002550228
• Protein GI: 222149271
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.677352
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACACTG GCATTGTAAC ATCGACTATC GCAACACCTG CTGCCGACTT CGTGGAGCAG 
GCACGCACTC AACAGCTCTC CCTGACAAAG TTGTTCGAAG TCGCCGAGCA ATACGCCAGA 
GCAGGTCGGG TCGATCAGGC CATGGAACTT TACAAGGCCT GGATTGCCTA TAACAGCGCC 
CATCCGCTGG CGCACATGGT CTATTTCAAC TATTCCGTCA CCTTGAGACA GCTTGGCGAT 
ATGGCAGGGG CGATCAATGC CCTGCGCGCC TGCCTGAAGA TTGATCCGGA ATTCGGCGCA 
GCCCATGTCA ATCTCGGCCG GTCTCTGGAA GACAGCGGGC TGCTCAACGA TGCCCTGCAA 
CAATGGCGCA GCTTTGCCGA AATGACCACG GATATTTCGC CTGACCGGCT TGCCAATCGC 
ATCATGGTGC TGGAGCATAT TGGTCGCGTG CTGGAAAATG CCGGTCTGAT GGAAGAGGCT 
GAAGCCTCCC TGTGGAAAGC AATCGAGCTG CGGCCCGACA AGACTGAGGC CGGTCAGCAT 
TGGTCCGCCA TACGGTTGCG CCAATGCAAA TGGCCTGTCC TGCAAGAATC TCCCTATGTC 
ACCATGCGCC AATTGCTGGA TGCGGTGTCG CCGTTGACCA TCTCTTGCTA CTCAGACGAT 
CCGCTGTTTC ATCTGGCCAA GGCCTATCGC TGCAACAAAA CAATGATCGG CCGTCCGGAT 
CTCAGCGCCG TACCAAGCCA GTCGCCACGC CAAAAGACCG GAACCGGCCA GCGGTTACGT 
GTCGGTTATC TGTCATCCGA CCTTCGCGAC CATGCGGTCG GCTTTGCGCT GCGCGAAGTT 
CTGGAGTTAC ATGACAAGAC CAGTATCGAA GTGTTCGCCT ATTATTGTGG CGAACCGATA 
GCACTCGACG AAACCCAGCA ACGTATCAAA CAGGCGGTCG ATGGCTGGCG CGATATTTTT 
GCGCTGAGTG ACGTCGATGC AGCCCGGCTG ATCGCAGCCG ATGAAATCGA CGTGCTGATC 
GATGTTAACG GCTACACGAA ACATGCACGC ACCCGGATTT TCGCCTATCG GCCCGCGCCT 
GTTATCGTCA ATTTCTGCGG CTATCCCGGC TCAATGGCAA GCCCCTTCCA TCAATATATG 
ATCGCGGACA ATCATATTGT TCCGCCTGAA CACGAGATCT ATTACTCGGA AAAAGTATTG 
CGGATCGCCT GCAACCAGCC GGTCGATCGC AAGCGGAAGG TGGCGCCGCG CCCGACACGC 
GCCGAAGTGG GCCTACCCGA AGACGCCTTT GTCTTTGCCT GCTTCAACGG CATGCAGAAG 
ATTACGCAAA GCGGCTTTAC CCGCTGGATG ACCATCCTGC AGGCGACACC CGGCAGCGTG 
CTCTGGTTGT TGTCCGGCAA CGAAGAGGTC AATCAGCGTC TGCGCGATAC GGCAACCCGG 
TGCGGCGTTG ATCCAGCTCG GCTGCTGTTT GCGGCCAAGG CTGGCAATGC GCAGCATCTT 
GCCCGCATCG CTGTTGCCGA TCTCTTTCTC GATACCTTCC CCTACGGTGC GCATTCCACC 
GCCGCCGACG CCATCAATAT GGGCTTGCCG GTCCTGACCT TCCCCGGCAA AAGCTTCGCA 
TCGCGTTTCT GCGCCAGCGT CGTGGCATCG GCGGGAGCGC CGGAGCTGAT CTGCCAATCT 
CCAGATGACT ATGTGCGGCG CGCCATCGCC TTCGCTCAGG ATCGCCAGAG TCTTGCGGCC 
GTCAAGGAAA GCCTGAGCCG GCAATTCGAA ACCAGCGCCC TGCGTGACAT GCCAGGCCTC 
GCCCGCCGGC TCGAAGAATT GTTCTGGCAG ATGCAAGGCG AATGCGAGCG GGGAGAAACA 
CCCAAGCCTG AGCTGCTCAA TATGGAGGCC TATTACGAGA TCGGTGTCGA ATTCGCCATG 
GAGAATATCG ATTTCGAGGA CGATCACACC TATCGGCAGC GCTACCGGGA AAAGCTTGCC 
AAGTGGAATA GGCACACACC CTTGCTTCCC GACAAGCGGC TGTGGACCGG CATGGAAGAC 
TGA 

 

Protein sequence

MDTGIVTSTI ATPAADFVEQ ARTQQLSLTK LFEVAEQYAR AGRVDQAMEL YKAWIAYNSA 
HPLAHMVYFN YSVTLRQLGD MAGAINALRA CLKIDPEFGA AHVNLGRSLE DSGLLNDALQ 
QWRSFAEMTT DISPDRLANR IMVLEHIGRV LENAGLMEEA EASLWKAIEL RPDKTEAGQH 
WSAIRLRQCK WPVLQESPYV TMRQLLDAVS PLTISCYSDD PLFHLAKAYR CNKTMIGRPD 
LSAVPSQSPR QKTGTGQRLR VGYLSSDLRD HAVGFALREV LELHDKTSIE VFAYYCGEPI 
ALDETQQRIK QAVDGWRDIF ALSDVDAARL IAADEIDVLI DVNGYTKHAR TRIFAYRPAP 
VIVNFCGYPG SMASPFHQYM IADNHIVPPE HEIYYSEKVL RIACNQPVDR KRKVAPRPTR 
AEVGLPEDAF VFACFNGMQK ITQSGFTRWM TILQATPGSV LWLLSGNEEV NQRLRDTATR 
CGVDPARLLF AAKAGNAQHL ARIAVADLFL DTFPYGAHST AADAINMGLP VLTFPGKSFA 
SRFCASVVAS AGAPELICQS PDDYVRRAIA FAQDRQSLAA VKESLSRQFE TSALRDMPGL 
ARRLEELFWQ MQGECERGET PKPELLNMEA YYEIGVEFAM ENIDFEDDHT YRQRYREKLA 
KWNRHTPLLP DKRLWTGMED