Gene Avi_3058 details

Gene Information

• Locus tag: Avi_3058
• ID: 7388620
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: -
• Start bp: 2542247
• End bp: 2542786
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 643652025
• Product: Membrane-bound lytic murein transglycosylase B protein
• Protein accession: YP_002550209
• Protein GI: 222149252

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCCCGGCT GTTTTCTTAT GCTGGGAACG ATCATGACCA ATTGGCCTCA ACAGTCTGCC 
GCTGCCGATT TCTACGGCAA GAACCTCAAA ATCTCCAAAG GCGTTGCCGG ACCTGATCCA 
GCCTGGGAAA GGGCAAGCCT GGTCCTTGTT CCAATCCCGT GGAGGGCCGT AGCGGCCTGG 
GACAAAACCA TCCCGCTTAA ATCGTTCCGC GTCCACACCA AGGTCGCTGG CAGCCTCGGT 
CGCGTCCTCG GCAATATCTG GGATGTGTTC GGCAAGTCCC AGAAGACCAT TGAAGCCAAG 
AACCTGCATC TGATCGGTGG TGGCTATAAC TGGCGGCTGA TGCGGGGCAA GGCCGCTCTC 
TCCATGCATG CCTATGGCTG CGCCGTCGAT ATGGACCCGA CACACAATGC GCTTGGCGAT 
CCGACGCCGG ACATGGACCC GCGCGTTGTC GAAGCCTTTG AAGCCGAGAA CTGGATCTGG 
GGTGGACGCT GGTCGCCGCA ACGCCGTGAC GGCATGCATT TTCAGGCGGC GATCGTATGA 

 

Protein sequence

MPGCFLMLGT IMTNWPQQSA AADFYGKNLK ISKGVAGPDP AWERASLVLV PIPWRAVAAW 
DKTIPLKSFR VHTKVAGSLG RVLGNIWDVF GKSQKTIEAK NLHLIGGGYN WRLMRGKAAL 
SMHAYGCAVD MDPTHNALGD PTPDMDPRVV EAFEAENWIW GGRWSPQRRD GMHFQAAIV