| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3048 |
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| Symbol | |
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| ID | 7388614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2538404 |
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| End bp | 2539762 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643652019 |
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| Product | hypothetical protein |
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| Protein accession | YP_002550203 |
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| Protein GI | 222149246 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4373] Mu-like prophage FluMu protein gp28 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0449427 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTCGC CTGCCGTCCC GCTTTATGGC TATCAGCAGC GCTGGCTGCT CGATCGCTCG
CGCTTCAAGC TCGGCATGTT TGCCCGCCAG ACCGGCAAGA CCTTTACGAC GACGCTGGAG
ACCGTGGACA CCTGCTTTGA AGCGGCTGTC TCCGGCAAGC GCGAACGCTG GGTGATCCTG
TCGCGTGGTG AACGCCAGGC GCGGGAAGCC ATGAACGAGG GCATCAAGGT CCATTGCAAG
GCCTATGACT TGGCGTTTCA GGAGGCTGAA TTCGATTGGG AAGGCGAGAG CGGCACCCAT
AAGGCGCTGG AGGTCACGTT GCCTCATGGC TCCAAGATCA CAGCGCTGCC TGCTAATCCG
GACACGGCAC GCGGCTTTTC CGCCAATGTC TTTCTCGATG AATTCGCTTT CCACAAAGAC
AGCCAGCAAA TTTGGCGGGC GTTGTTTCCA GTCATTTCCA AGGGCTGGAA TATCCGCGTC
ACGTCCACAC CGAACGGCAA AAGCAATAAG TTCTATGAGC TGGCAACCGG GCCAATCGAT
GATCCCTGGA GCCGCCACGT CGTTGATATC TATCAGGCGG TGCGGGATGG GTTGCCGCGC
GACATCGAAG AGCTGCGCGC CGGTCTGGCA GATGAGGATA GCTGGGCGCA GGAGTTCGAA
CTGAAGTGGT TGGACGAGGC AAGCGCCTGG CTATCCTACG ATCTGATTTC GTCTTGCGAG
GATGAGCGTG CCGGAGACCC TGAAGGCTAT CAGGGCAATG TTTGCTTCGT CGGCCGCGAT
ATCGGCCGAC GCGAGGACCT GCATGTCATC TGGGTCTGGG AGCAGATCGG CGATGTGCTT
TGGGAGCGTG AGCGGATCGA GCAGAAGCGC GCCACCTTTG CCGAAATGGA CGAAGCCTTC
GATGATGTCA TGACCCGCTA CCGCGTCGGC CGGGCATGTA TCGACCAGAC CGGCATGGGC
GAGAAAGTCA CGGAAGACGC ACAGATCCGC TATGGCAGCC GGGTTGAAGG CGTGTTGTTT
ACCGGCCCGA ACAAGCTGGT CATGGCAACG CGCGGCAAGG AGCGGTTCGA GGATCGCACC
GTGCGCATCA GCCAGGGCGA TCAGAAGCTG CGCGCTGATC TTCACAAACT GCGCAAGGTG
GCGTCTGCCA CTGGCGCGCC ACGCTTTGTG GCCGAGCGCG ATGACGATCA CGCCGACCGC
ACCTGGGCAG CGTTCCTGGG CATCCATGCT GCCGACGGCA TCGTGGGTGA ATACGCCTAT
CAGCCAGCGC CGGCACCACC ATCCAAGTTC TCAGAACAGC AGGGTGACGA TGAGCCCTAC
CGCGTCTCCT CAATGCGCAA CAGACGTGGA GGCTATTGA
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| Protein sequence | MKSPAVPLYG YQQRWLLDRS RFKLGMFARQ TGKTFTTTLE TVDTCFEAAV SGKRERWVIL
SRGERQAREA MNEGIKVHCK AYDLAFQEAE FDWEGESGTH KALEVTLPHG SKITALPANP
DTARGFSANV FLDEFAFHKD SQQIWRALFP VISKGWNIRV TSTPNGKSNK FYELATGPID
DPWSRHVVDI YQAVRDGLPR DIEELRAGLA DEDSWAQEFE LKWLDEASAW LSYDLISSCE
DERAGDPEGY QGNVCFVGRD IGRREDLHVI WVWEQIGDVL WERERIEQKR ATFAEMDEAF
DDVMTRYRVG RACIDQTGMG EKVTEDAQIR YGSRVEGVLF TGPNKLVMAT RGKERFEDRT
VRISQGDQKL RADLHKLRKV ASATGAPRFV AERDDDHADR TWAAFLGIHA ADGIVGEYAY
QPAPAPPSKF SEQQGDDEPY RVSSMRNRRG GY
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