Gene Avi_3035 details

Gene Information

• Locus tag: Avi_3035
• ID: 7388603
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: -
• Start bp: 2524499
• End bp: 2526571
• Gene Length: 2073 bp
• Protein Length: 690 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 643652008
• Product: transposase protein
• Protein accession: YP_002550192
• Protein GI: 222149235

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.277466
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGGAAT GGTTCTCTCT TGCTGAACTG GCGCAAATGC AGCTGCCCGA TTTGCCTCAT 
AACATGGCGG GTCTGCATAG GGTCGCCACG GAGGCAAACT GGCGCGAACA TCCTACTCAT 
GCGCGAAAAG TCAAAGGCCC GACCAAGCCG GTTTGGCTGT ATCATATCGC TCTGTTGCCA 
GCTCCGGCAC GGACGCGGAT TGAAATGGCG GCGTCGGCTG TTGCCCCGGA AGAATGGGAC 
GCGATCCGTA CCCGCAAAAA TCAACTTTGG GCGCGGTTTG AACGGCTTTC AAATGAACAT 
CGAGACATCT GCAAAGCCCG TTTGAGCGTG CTTTGCCGGG TCGAGACGCT GGCGGCGCAG 
AAAGGTGTCA GTAGGGCAGC CGCCATTGCT ATCGCCACGT CGGAGGCGGA GGTCCAGAAG 
TCCACCTACT ACGAATGGAA AGGACTGACG GAAGGGCTTG ATCGCGACGA CTGGCTTGCT 
GCCTTGGCTC CATCGTTTTC TCCTGCGGTT GATGGTGTCG TTGCCGATGT GGCCGATTGC 
CATCCTGATG CATGGACGTT CCTCAAGTCC GATTATCTGA GACCGGAGAA GCCCGCATTT 
TCTGCCTGCT ATCGTCGGAT GATGACGGTG GCGAAGCGTG AGAAATGGGC TCCGATCCCT 
TCCGAGCGGT CTTTGCGCCG CCGGTTTGAG CGTGAGGTCG GCAAGGCCGT GACGCTCTTT 
AAGCGCGAGG GCCGTGACAA GGCAAAGGCG CTCTATCCAG CTCAGCGCCG TAGCCGCGCG 
CACCTGCACG CGATGCAAAT GGTCAATATG GATGGACACA AAGTCGATGT GTTCGTGTCC 
GTGCCATGGA AAAAAGAGCC AACCCGCATG TTCATCATCG GTATTCAGGA TCTGTTTTCC 
GGGAAAATCC TGTCCTGGAG ACTATCGGAA AGCGAGACAT GGGAAGCCGT GCGACTGGTC 
ATTGGTGACA TGGTCGAGGC TTTCGGCATT CCTGAAGACA TCTACCTGGA TAACGGCAGG 
GCTTTTGCCA GCAAGTGGAT AACAGGCGGC ACAGTCAACC GTTTCCGTTT CAAAGTGAAG 
CCAGAAGATC CGCGCGGCTT GCTGACCACG CTGGGTGTTG AGGTGCATTG GACCCGGCCA 
TATTCGGGCC AGTCCAAGCC GATTGAGCGT GCATGGCGTG ATCTGGCGGA AAACATTGCC 
AAACATCCGT TTTGTGCGGG GGCGTACAGC GGTAATAAAC CGGATGCCAA GCCCTGGAAC 
TACATGGAGC GGGCTATTCC GCTGGAAGAC TTCCGGATGC ATGTGGCGGC TCAGATTGTT 
GAGCATAACG CGCAAGCTGG CCGCCGGGCC GAGAATTGCA AGGGGCGTAG TTTTGATGAG 
ACCTTTGCGG CCTCGATGGC GGCACCCTCG ACAATTGTTC GGGTTCCATC CAACGCGCAG 
GCAGCATTGT GGTTGCTGGC GTCCGAGGCG ATCAAGACCC AGAAATCGAA TGGTGGGATA 
CATTTCCAAG GCAATCGCTA TTGGAGTGGG GAGCTGAACC AATGGGCCGG GAAGCAGGTC 
ATTATCCGGT TTGACCCTGA TTTTCTGCAC AAGCCGATCA AAGTGTACGA CCTCAAAAAC 
CGGCTGATCT GCGAGGCAGC GTGCGTGGAT GATGCTGGCT TCAAGAACAG AGACGATGCG 
CGTGCGCATT CTCGCCTCGC CAGCACCCAC ACCAAGGCCG TTGCTGCCAA GGCCGAGGCG 
GAAGCCGCAC TGTCGGCCCA GCAGCTGGGC GAGATCTATT ACAAGGGGTC CAAACCACCA 
AAGCCAGCAG ATGTGCCGGA GACAGTCCGT CCTGCTGTGA CCCGCCTGAT CACCCGCAGC 
CAGCAGGTGG AAGCACCTGT GGATGCGATT TCGGATCAAC ATTTCGAAGA CAGTTTTTCC 
CGCGCGCTGG GCCTGGTTCA GGGCGGTGGG GTCATTGAAT TCCCGAGAGG GAATAGCCCG 
GTGTCGCGTG TTTCGGACAC CGGGAAGAAC GAGCCGAAGA GTATTGCGTA CGGTTCCGGA 
AAAAAGAAGG GCAGTCCGAA GACTGCCCGA TAA 

 

Protein sequence

MKEWFSLAEL AQMQLPDLPH NMAGLHRVAT EANWREHPTH ARKVKGPTKP VWLYHIALLP 
APARTRIEMA ASAVAPEEWD AIRTRKNQLW ARFERLSNEH RDICKARLSV LCRVETLAAQ 
KGVSRAAAIA IATSEAEVQK STYYEWKGLT EGLDRDDWLA ALAPSFSPAV DGVVADVADC 
HPDAWTFLKS DYLRPEKPAF SACYRRMMTV AKREKWAPIP SERSLRRRFE REVGKAVTLF 
KREGRDKAKA LYPAQRRSRA HLHAMQMVNM DGHKVDVFVS VPWKKEPTRM FIIGIQDLFS 
GKILSWRLSE SETWEAVRLV IGDMVEAFGI PEDIYLDNGR AFASKWITGG TVNRFRFKVK 
PEDPRGLLTT LGVEVHWTRP YSGQSKPIER AWRDLAENIA KHPFCAGAYS GNKPDAKPWN 
YMERAIPLED FRMHVAAQIV EHNAQAGRRA ENCKGRSFDE TFAASMAAPS TIVRVPSNAQ 
AALWLLASEA IKTQKSNGGI HFQGNRYWSG ELNQWAGKQV IIRFDPDFLH KPIKVYDLKN 
RLICEAACVD DAGFKNRDDA RAHSRLASTH TKAVAAKAEA EAALSAQQLG EIYYKGSKPP 
KPADVPETVR PAVTRLITRS QQVEAPVDAI SDQHFEDSFS RALGLVQGGG VIEFPRGNSP 
VSRVSDTGKN EPKSIAYGSG KKKGSPKTAR