| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3008 |
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| Symbol | |
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| ID | 7388589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2513913 |
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| End bp | 2515556 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643651994 |
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| Product | hypothetical protein |
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| Protein accession | YP_002550178 |
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| Protein GI | 222149221 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4373] Mu-like prophage FluMu protein gp28 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.505507 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGGTC CTGTCAGCAA GGAAGAATGG GCGAAAGCTC GACGGTTTTC TACAGATGCC
GTCCTCGGCT TGGTCGGGAA GGAAGGCCTT GGCAAGGCAC TATTGCCGTA TCAGTCGCGG
ACAGTTGGTC TCCTTGAAAG CTCGGCTTGC AAGGTTCTCT TCGTTGAGAA AAGCCGTCGT
ATCGGTCTGA CATGGGGCTT TGCCTCCTAT GCCGCATTGC GCGCCGCCAG GGCAAAGAGC
GCCGGTGGCA TGGACGTGAT GTATATCTCC TATAGCCAGG AGATGACCCG CGAGTTTATC
GACGCCTGCG CGATGTGGGC TCGTGCCTAC TCGTTGGCCG CCATGGAAAT GGAAGAGTTC
GTCTTCGAAG ATAAGACCGA AGACGGTGAT CGCTCTATTC AGGCCTTCCG TATTCGCTTT
GCCTCAGGGT TCGAAGTGCT GGCCCTTTCT TCAGCGCCAC GCACTCTGCG CGGTAAGCAG
GGTGTGGTGA TGATCGATGA GGCGGCGTTC GTCGATAGCT TGCCGGAGCT GCTGAAGGCC
GCACTGGCGT TCCTGATGTG GGGCGGCCAA GTTGTCGTTT GCTCCACTCA CAATGGCGCG
GAAAACGAGT TTAACCTCCA GATCCAAAAC ATCCTCGGCG GTCGTAACAA ATACGATCAC
ATCAAGATCG ACTTTGACGA CGCGCTGCGG GATGGCCTCT ACGAGCGGAT TTGCCTCGTC
ACCAATCAGG AATGGTCCCC TGAAAACGAA GCCGACTGGC GCGAAGACAT CATCGACTTT
TACGGCGATG GTGCGGACGA AGAGTTGTTC TGTGTTGCCT CCATGGGGTC TGGCGCCTGG
TTGACCTCGC CCCTGATCGA AGCGCGCATG ACGTCGGATG CTCCGGTCCT GACGCTTGAT
CTTCCTGACA ACTATTTGCA TCTGTCGGAA CTTGAACGCG CAAAATTGCT AGCTCCATTC
ATGGAGGAGC TGGACGAGGC GCTGGACAAG CTTGATCCGG CATTGATGCA TGCCTTCGGT
TTTGACTTTG CGCGCGTTGC TGACCTTTCG GTCGGGAAAC TGTTGGCGAT TGACAAGAAG
CTCAATCGCA AAAGCGCGTT GACCGTCGAA CTGCGCAAGG TGCCGGGCGA CGAACAAAAA
CAAATCACAG AGAAAATCCT TCGACGTGCC CCGCGTTTGG TCGGGGCGGC CTTCGACGCC
ACCGGCATGG GTTGGACAGT TGCCGAAGAC ATGGGGCGGC TTTTTGGCCT GAGGGATAAG
GACAATGAAG GTGGTCTGGT TCACGCGATC AAGTTTTCGC AGGACTGGTA TCGTATCCAT
ATGCCGCCGC TTAAAACCGC GTTTGAAGAC GCGGCAATTT CCATTTCCAA GAACGCAGAC
CATCTTTCCG ATCTTCGCTT GGTCAAAGTG ATACGCGGCA TTCCAATGGT GCCGGAAGCG
CGTACGGGCG AGAAAAACAA GAAACGCCAC GGGGACTATG CGATCGCGCT GGCCTTGGCC
CATTTCGCAA GCCGTATGCA GTGGTGTGAA TTCGATTACC AACCAGCACC GCCGTCTGCG
TCCCGCTCGT CAGAAACACC CTCCAGAGAC GATGAGCGAC CGTTTCGCAT GTCGTCGCTC
AGAAACAAAC GTGGAGGCTT TTGA
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| Protein sequence | MTGPVSKEEW AKARRFSTDA VLGLVGKEGL GKALLPYQSR TVGLLESSAC KVLFVEKSRR
IGLTWGFASY AALRAARAKS AGGMDVMYIS YSQEMTREFI DACAMWARAY SLAAMEMEEF
VFEDKTEDGD RSIQAFRIRF ASGFEVLALS SAPRTLRGKQ GVVMIDEAAF VDSLPELLKA
ALAFLMWGGQ VVVCSTHNGA ENEFNLQIQN ILGGRNKYDH IKIDFDDALR DGLYERICLV
TNQEWSPENE ADWREDIIDF YGDGADEELF CVASMGSGAW LTSPLIEARM TSDAPVLTLD
LPDNYLHLSE LERAKLLAPF MEELDEALDK LDPALMHAFG FDFARVADLS VGKLLAIDKK
LNRKSALTVE LRKVPGDEQK QITEKILRRA PRLVGAAFDA TGMGWTVAED MGRLFGLRDK
DNEGGLVHAI KFSQDWYRIH MPPLKTAFED AAISISKNAD HLSDLRLVKV IRGIPMVPEA
RTGEKNKKRH GDYAIALALA HFASRMQWCE FDYQPAPPSA SRSSETPSRD DERPFRMSSL
RNKRGGF
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