| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3003 |
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| Symbol | |
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| ID | 7386163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2509620 |
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| End bp | 2510591 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643651991 |
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| Product | I protein |
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| Protein accession | YP_002550175 |
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| Protein GI | 222149218 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4388] Mu-like prophage I protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.735165 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGCTCC CGATCGGATC GTTTTCCGGC CGCGACGGTC GTGGTCCCTA TTCGACCAAT
GGTCTTGAAG GCATGCGGGC CGTGATTGCT TCCACCGAGC AGCGCGCCGG CAGCACCGAC
CTCGTGGTCG ATTACGATCA TCAGACGCAG TTCTCGGCCG TGCCCGGTGT GGGTGGCCAG
GCTCCGGCTG CCGGCTGGAT CAAGCAGCTC GACGCCCGTC CCGACGGCCT CTATGGTCTC
GTCGAATGGA CGGACAAGGC AGCCCAGGCC ATCCGGGCTG GCGAGTATCG CTACATTTCC
CCCGTCTACC AGCACGATAA GGCCGGCCAG GTGCTGCGGC TGATTTCGGC CGGATTGACC
AATGTGCCCA ATCTCGAACT TGCGGCCGTG GCCGCCAGTG CTCAGCAAAA TTGCGCTCAA
CCCAACCAGG AAAACGATAT GAAGAGAATT GCCGCCGCCT TGGGGCTTTC CGAGGACGCG
GATGAGAATG CTATTCTCAT CGCGATCAAC AGTGTGCTGA CCGGCAATGC GGCGATTGCC
GCTGCGGCTG GTCTGTCGGC CACCGCCAAA CCCGCCGAGA TCGTCACTGC GATTAACTCC
GCGCGCGCCG ATGTTGATCC CACGAAGTTC GTGCCAATCG AGCAGGTCAC AGCGCTCCAG
ACCGGTTTGA AGGCCCTTCA AACCAAAATG GAAGGCGAGG AGGCTGAGAC GGCCGTTAAC
CGGGCGATCA CCGAAGGCAG GCTTGCGCCG GCACTGAAGT CCTGGGGCCT TGACCTGCAC
AAGAAAGATG CCGCAGCCTT CAAGGCTTTT GCTGATGCAT CTCCGGTTCT GACGGCAACC
CAGCGTGCCG GGGTTACGCC GCCCGGCAAT GGCACTGACG CGGATCTGAC AACGGAGGAT
CTGGCGGTCA TGAGCCAGAT GGGTCTCAGC AAGGAAGCCT TCCTCAAGGC CAAGAAAGGC
GGTGACGCAT GA
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| Protein sequence | MLLPIGSFSG RDGRGPYSTN GLEGMRAVIA STEQRAGSTD LVVDYDHQTQ FSAVPGVGGQ
APAAGWIKQL DARPDGLYGL VEWTDKAAQA IRAGEYRYIS PVYQHDKAGQ VLRLISAGLT
NVPNLELAAV AASAQQNCAQ PNQENDMKRI AAALGLSEDA DENAILIAIN SVLTGNAAIA
AAAGLSATAK PAEIVTAINS ARADVDPTKF VPIEQVTALQ TGLKALQTKM EGEEAETAVN
RAITEGRLAP ALKSWGLDLH KKDAAAFKAF ADASPVLTAT QRAGVTPPGN GTDADLTTED
LAVMSQMGLS KEAFLKAKKG GDA
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