| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2949 |
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| Symbol | |
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| ID | 7386124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2465418 |
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| End bp | 2466410 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643651951 |
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| Product | ABC transporter membrane spanning protein |
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| Protein accession | YP_002550136 |
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| Protein GI | 222149179 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4132] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.41093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGTTG CGGAGACCGA GCTTCATTCG CCAGCCAGTG CATCCGTGCC AAATTCATCC
AGGCCCAGTG CGCCGACGCT CAACGCCCCC CTGCCCAGCC TACCCATCGT CGAAGGCTCC
AGACAGCAAC CAGCACCTCG CCCCAAAAGC CGGGTAAACT GGGATTGGCT GGGTGTGCTG
CCGTTTTTCC TGTTTGCCAT TCTGTTTCTG ATCGGCCCGA TCCTTTATCT GGTCAAAGGC
TCTTTCCAGA ATCCGGCCGG TGATTTCACG CTGGAAAATT TCATCAGCCT GGCCACACCC
AATATCATGG CCGCCTATTC CCTGTCGCTG CGCCTGAGCC TGGCCGCAGC TTGTCTTGGC
GCCATCGCTG GTCTTCTGGT GGGCTATGCC ATTATTCTCG GTGGCTTGCC GCGCTGGGTG
CGCACCGCCT TCATGACATT TTCTGGCGTT GCCTCGAACT TCGCTGGTAT TCCGCTGGCC
TTTGCCTTCA TCGCCACTCT TGGAAGGTTG GGCCTTGTCA CGGTTCTGTT GCGTGACATG
TTCGGCTTCA ATCTCTATGG CACGGGCTTC AGCCTGTTCT CATTCTGGGG CCTGGCGATC
ACCTACCTTT ATTTCCAGCT GCCGCTGATG GTGCTGATCA TCACCCCCGC TCTCGACGGC
TTGAAGGGTG AATGGCGCGA AGCGGCGGAA ATTCTCGGCG CCACCCGCCG CCAATATTGG
CAAATGGTCG CCCTGCCGGT GCTGACCCCC TCCATTCTCG GTTGTTTCCT GCTGCTGTTT
GCCAATGCCT TTGGCACGCT GGTCACTGTC TATGCCCTGA CCGGCTCCAG CTTCGGCGTG
GTGCCCATCG TGCTTTACCA GCAAATTCAG GGCAATGTGC TGTACAATCC CAATCTTGGC
TATGCGCTGG CGGTTGGCAT GGTGGCTATC ATGGCCGTTA CCAATACGCT CTATCTTATC
CTGCGCAGCC GCGCCGAACG GTGGCAAAAA TGA
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| Protein sequence | MTVAETELHS PASASVPNSS RPSAPTLNAP LPSLPIVEGS RQQPAPRPKS RVNWDWLGVL
PFFLFAILFL IGPILYLVKG SFQNPAGDFT LENFISLATP NIMAAYSLSL RLSLAAACLG
AIAGLLVGYA IILGGLPRWV RTAFMTFSGV ASNFAGIPLA FAFIATLGRL GLVTVLLRDM
FGFNLYGTGF SLFSFWGLAI TYLYFQLPLM VLIITPALDG LKGEWREAAE ILGATRRQYW
QMVALPVLTP SILGCFLLLF ANAFGTLVTV YALTGSSFGV VPIVLYQQIQ GNVLYNPNLG
YALAVGMVAI MAVTNTLYLI LRSRAERWQK
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