| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2929 |
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| Symbol | chvD |
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| ID | 7386109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2448409 |
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| End bp | 2450058 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643651936 |
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| Product | putative ABC transporter ATP-binding protein |
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| Protein accession | YP_002550121 |
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| Protein GI | 222149164 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACGTC AGTTCATCTA CCACATGTCC GGGCTTAACA AAGCCTATGG CGCCAAGAAG
ATCCTTGAGA ACGTCAACCT GTCTTTCTAT CCAGATGCCA AGATCGGTAT TCTCGGCCCG
AACGGTGCCG GTAAATCGAC GGTTCTGCGC ATTATCGCCG GTCTCGACAA GGAATATACC
GGTGAAGCCT GGCTCGCCGA AGGCGCGACC ATGGGCTATC TGGAACAGGA ACCGAAGCTG
AACCCTGATA AGACCGTGTT CGAAAACGTC ATGGAAGGCG TTGCCTCCAA GACCGCCGTC
CTCGACCGTT ACAACGAGTT GATGATGAAT TACTCGGATG AGACGGCTGA CGAGGGCGCA
AAGCTTCAGG ATATCATCGA TAGCCAGAAC CTTTGGGATC TGGAAAATCA GGTCGAAATG
GCCATGGATG CGCTGCGTTG CCCTCCGGGC GACAGCGATG TGACCAGCCT GTCCGGTGGT
GAGCGGCGTC GCGTGGCGCT GTGCAAGCTG CTGCTGTCAA AGCCCGACCT GCTGCTGCTC
GACGAACCAA CCAACCATCT GGACGCTGAA ACCATCGGCT GGCTGGAAAA CCATCTGCGG
GAATATCCCG GTTCCGTGCT GATGATTACC CACGATCGCT ACTTCCTCGA CAATGTCACC
GGCTGGATTC TTGAACTCGA CCGTGGCCGT GGCATTCCTT ACGAAGGCAA TTACTCGGCC
TATCTGCAAG CCAAGGCCAA GCGCCTGATG CAGGAAAGCC GCGAAGATGC GTCGCGTCAG
AAGGCGCTGT CGCGCGAGCA GGAATGGATC GCATCCAGCC CCAAGGCCCG TCAGGCCAAG
TCCAAGGCCC GTATCAAGTC CTATGAGCAA CTGGTGGAAG CGGCTGAAAA GCAGCGTCCC
GGCGATGCGC AGATCATCAT TCCCGTCAGC GAGCGACTGG GCCAGGTGGT CATCGAGCTG
GACGGGATTT CCAAATCCTA CGGCGACCGT CTGCTGATCG ACAACCTGAG CCTGAAACTA
CCGCCGGGCG GCATTGTCGG CGTGATTGGC CCGAACGGTG CCGGTAAGAC GACGCTGTTT
CGGATGATCA CCGGCCAGGA AACCCCAGAT TCCGGCTCGG TTAAAGTTGG CGACAGCGTG
CAGCTTGGTT ACGTCGACCA GAGCCGCGAT ACGTTGGCTG CCGACAAGAC CGTTTGGGAA
GAAATTTCCG GTGGGGCCGA AATCATCAAG CTCGGCAAGT TCGACATGAA CTCCCGCGCC
TATTGCGGTG CCTTCAACTT CAAGGGCGGC GACCAGCAAC AGAAGGTCGG CAATCTCTCC
GGCGGTCAGC GCAACCGCGT GCATCTGGCC AAGATGCTGA AGGCTGGCGG CAATGTTCTG
CTGCTCGACG AACCGACCAA CGACCTCGAT ACCGAAACGC TCGGCGCGCT GGAAAATGCG
CTGGAAAGCT TTGCCGGCTG CGCGATCATC ATCTCGCATG ACCGCATGTT CCTCGACCGT
CTGGCCACCC ACATTCTCGC CTTCGAAGGC GACAGCCACG TGGAATGGTT CGAAGGCAAT
TTCGAGGACT ACGAAAAGGA CAAGATCCGT CGGTTGGGTG CTGAAAGCGT CAACCCGAAG
CGCGTCAGCT ACAAGCGCCT GACCCGGTAA
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| Protein sequence | MARQFIYHMS GLNKAYGAKK ILENVNLSFY PDAKIGILGP NGAGKSTVLR IIAGLDKEYT
GEAWLAEGAT MGYLEQEPKL NPDKTVFENV MEGVASKTAV LDRYNELMMN YSDETADEGA
KLQDIIDSQN LWDLENQVEM AMDALRCPPG DSDVTSLSGG ERRRVALCKL LLSKPDLLLL
DEPTNHLDAE TIGWLENHLR EYPGSVLMIT HDRYFLDNVT GWILELDRGR GIPYEGNYSA
YLQAKAKRLM QESREDASRQ KALSREQEWI ASSPKARQAK SKARIKSYEQ LVEAAEKQRP
GDAQIIIPVS ERLGQVVIEL DGISKSYGDR LLIDNLSLKL PPGGIVGVIG PNGAGKTTLF
RMITGQETPD SGSVKVGDSV QLGYVDQSRD TLAADKTVWE EISGGAEIIK LGKFDMNSRA
YCGAFNFKGG DQQQKVGNLS GGQRNRVHLA KMLKAGGNVL LLDEPTNDLD TETLGALENA
LESFAGCAII ISHDRMFLDR LATHILAFEG DSHVEWFEGN FEDYEKDKIR RLGAESVNPK
RVSYKRLTR
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