| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2901 |
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| Symbol | |
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| ID | 7387982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2425407 |
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| End bp | 2426600 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643651918 |
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| Product | sarcosine oxidase |
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| Protein accession | YP_002550103 |
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| Protein GI | 222149146 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGATC AGGTTTTCAA ATATCTCATT ATCGGACGCG GTATGATGGG TGCGGCGGCG
GCGCGGCATC TGGCACTGCA AACGGATGGC GTGGCACTGG TCGGGCCGGA TGAGCCCGCT
GACAAGCAAA GCCACGAAGG CGTCTTTGCC AGCCATTACG ACGAAGCGCG AATCACCCGT
ACCATCGATA GCGATCCTGT CTGGGCAAAG CTCGCGCATG CGTCGATTGC CCGCTATAGT
GAAATCGAAC AGCAGAGCGG CATCCGGTTT TACCACGAGG CTGGTTGCCT GATCGTCGGA
ACGAGCCCGG ATGGTCATTC CGACTATGTC GCCAAGGCGG CGCGCGCTGC CGAAGGGCTC
GGCGTTTCCA CCCAGTCTTT CGACCATGCC GGTCTTGCCG AGCGTTTCAG TTATTTCCGG
TTCGAGCCTG TTTCCATTGG GATTTATGAG GCGCATCACG CCGGCTACGT CAATCCGCGC
CGTTTGGTGG AGGCCCAGTC GGAGCTGGCT GCTCGGGCGG GGGCATCTCT GATCAACGAT
GTGGTCATAG ACATTCGCGA CGAGGGCGGC CATGCGGTGG TCACGACCGC AGGCGGCAAG
GCGTTGAAAG CCGAAAAGCT GCTGGTTGCC ACGGGCGGAT TTTCCATTGC CGAAAGACTG
TTGCCGCGCC GGATTGATCT GTCGGTTTAT GCCCGCACGG TGACCTTTTT CGAAATCGCC
GATCAGGATC TGCCCGCCTA TCACGGTATG CCGTCGCTCA TTCACGAGCC GTCCAATCCA
CGCGATCATA TCTATCTGCT GCCGCCCGTG CGCTACCCTG ATGGTAAAAC CTATCTCAAG
ATCGGCGGCG ATCCCGATGA TGTCAGGCTG AAGACCGAGC CCGAAATCCG CGCCTGGTTC
AGGGGTGGCG GACGGGAAAG CGCGCGTGAT CATCTGGCGC GCATTTGCAG ATCGCTGGTG
CCGGGCGTTG CCCAGGCGCC GGTGTCGATG GCCTCCTGCG TGACCTCCTT TACGGGCAGT
GGCTATCCGG CCATCGGGTT TAGCGACAGC CCACGCATCG CGGTGCTGAC TGGCGGCTGC
GGGGCGGCGG CGAAAAGCTC GGACGAAATT GGCCGGCTGG GTGCCGAGTT GATCCTGCGC
GGCACGATTG TCCATGAGGA GTATGATGCA GATTTCACGC CTGTTTTCGT TTGA
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| Protein sequence | MMDQVFKYLI IGRGMMGAAA ARHLALQTDG VALVGPDEPA DKQSHEGVFA SHYDEARITR
TIDSDPVWAK LAHASIARYS EIEQQSGIRF YHEAGCLIVG TSPDGHSDYV AKAARAAEGL
GVSTQSFDHA GLAERFSYFR FEPVSIGIYE AHHAGYVNPR RLVEAQSELA ARAGASLIND
VVIDIRDEGG HAVVTTAGGK ALKAEKLLVA TGGFSIAERL LPRRIDLSVY ARTVTFFEIA
DQDLPAYHGM PSLIHEPSNP RDHIYLLPPV RYPDGKTYLK IGGDPDDVRL KTEPEIRAWF
RGGGRESARD HLARICRSLV PGVAQAPVSM ASCVTSFTGS GYPAIGFSDS PRIAVLTGGC
GAAAKSSDEI GRLGAELILR GTIVHEEYDA DFTPVFV
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